Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1086 ATGGCAATTTCATTTTCTTTTGGTTTCCCCTTTGGTTCAATAGCCTCATACGATTATGCTAGTCCAAACAAAGAATTCCATTGGCTGGCATCTGTCCTCACCGGTATCATCTCCTGTGTTATTGTCTATAGATTGACTGCTCTTGTGAGCGCTCGGTTGTTTGAGGGATATGGCAAGTTGAGCAGTGCACGGAAAACTGAATGGAACAACAGGGGGTTCTCAACAGTACATGCTGTATTTGTATCAATTGCATCTTTCTACCTCCTGATGGTGTCAGATATCTTCCATAAGAATTTGGATGATGAACCAGTTGTTAGTAGATCATCTACTTTGTCAAATACTGTATTTGGGGTTTCTATAGGTTATTTTCTATCAGATCTTGCAATGATTCTCTGGCATTTTCCGGCTTTAGGGGGCCTGGAATATGTTCTACACCATGGACTGTCCATGTTTTCCATCATCCTCTCTCTACTAAGTGGTCAAGCACATCTCTACATACTAATGGTTCTTTTTAGTGAAAGCACTACTCCCTGTGTAAATCTAAGATGGTACTTGGATAATCTTGGTCTTAAGAACTCAATACTCTACATTGGGAATGGCATTGCATTGTTCCTTGGGTGTCTTGAATATGATGATGTACTAGGAAAGCATAGTGTCATCCAGCTAACTGATTTTCTGACCTCACTTAGTGGGATAATATGTGAAGACAATCTTTCCTCTTGGCTTTTACAGCTTGCTCGTGGTGCCTCCTATGTTGTCAATGATGAATATATTCTGGTTCTGGAAGATTGCCAAAGGTGGTTATCTCTGTATTACATGCAAGGACCCCAAGGTTCATCCCCTGGTCTATAA 852 0.4073 MAISFSFGFPFGSIASYDYASPNKEFHWLASVLTGIISCVIVYRLTALVSARLFEGYGKLSSARKTEWNNRGFSTVHAVFVSIASFYLLMVSDIFHKNLDDEPVVSRSSTLSNTVFGVSIGYFLSDLAMILWHFPALGGLEYVLHHGLSMFSIILSLLSGQAHLYILMVLFSESTTPCVNLRWYLDNLGLKNSILYIGNGIALFLGCLEYDDVLGKHSVIQLTDFLTSLSGIICEDNLSSWLLQLARGASYVVNDEYILVLEDCQRWLSLYYMQGPQGSSPGL 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1086 283 ProSiteProfiles TLC domain profile. 63 254 IPR006634 GO:0016020
Lele04g1086 283 PANTHER CT120 PROTEIN 30 204 - -
Lele04g1086 283 Pfam TLC domain 67 203 IPR006634 GO:0016020
Lele04g1086 283 SMART lag1_27 63 253 IPR006634 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1086 Lele-ChrLele04 6811529 6814602 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1360 25 9429492 9430924 Lele04g1086 04 6811529 6814602 CCT
Lele26g1367 26 9332148 9338237 Lele04g1086 04 6811529 6814602 CCT
Lele27g0722 27 15375684 15380462 Lele04g1086 04 6811529 6814602 CCT
Lele28g1353 28 9368017 9384497 Lele04g1086 04 6811529 6814602 CCT
Lele04g1086 04 6811529 6814602 Lele04g1086 04 6811529 6814602 ECH
Lele01g1072 01 6265419 6268350 Lele04g1086 04 6811529 6814602 hybridization
Lele02g1098 02 6945959 6948547 Lele04g1086 04 6811529 6814602 hybridization