Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1074 ATGAGTAAGTGGGTCCCACGGGATGTTTCGTCCACTAGAAAACCAGTGGCTGAAATTCGAAGTGAGAAGAAGCAAGCATTCCATGGGACAGGCAGACAGCGGATGATGGGAGAAACTTGGACGCAGGGACTTACACGTGCTGGGCTGTGCGAACGAGGGGCCCAAGATTTCAAAGTTCCGTTTGTGAGAAGCAAGAAACTGTTGCTTCTAGGAGCCTCCAAACTCGGGCCTAACAGACAGCCTACGTATTCTCTCGTGAAAATCTGTTATAGCCGGGGGTTTCGTCAAGCACGGGACTATTTTCTTAGGCTCGTGCTCGAAGTCTGCGTCACAATTAGGAATCGTACGTACGTGTGCTACGAAGTTGATTTGGCCATTTTCACAAAACTTGGGTATGTTTCATCTGCCATACAGAAATTGGGTAGCTCTGTTTGGCCCAAGAGGTCTGGTTTAAAGGATTCTGTCAGTGACCCCACTGAAGTTGACGCATTGAAAAGCATCAAAGCGAGTTTTATTGATCCTGATAGAAATCTGAACAACTGGAATCGTGGAGATCCATGTACATCTAAATGGAGAGGGGTTCATTGTTCCAATAGGACGCAGGCTGATAACTATTTACATGTTAAAGAATTGCGACTACTGAATTTGAACTTGTTTGGAACTTTGGCACCAGGGATTGGAAACTTATCTCATCTGGAAATATTGGACTTTATGTGGAACAATATAAGTGGGAGTATACCAAAGGAAATTGGTAACATCAAAAGTTTGAAACTCTTGCTTCTGAATGGAAACGATTTAAGAGGTCAGCTGCCCGAAGAGCTTGGTTATCTTCCAAACCTGAACAGAATGCAAATTGATCAGAACAATATTACAGGACCTATTCCTATATCGTTTGCTAACCTAAACAAGACAAGGCACTTTCACATGAACAATAACTCACTTACTGGACAAATCCCTCGAGAGTTTTCCCGCTTGTCAAGCATTATTCACCTCCTTCTTGACCATAACAAATTATCAGGAGATCTTCCACACGAGCTCTCCCAAATGCCACTCATCCGCATAATGTATGGTTTCTTGTCTAATGTTCACAGCGATTTGTCAAACAACAAGCTAACTGGAACTATTCCATCCAACTTTTCTGGTCTCCCAAGACTTCAACTATTGTCACTTTCAAACAATTCATTGAATGGTAGTGTTCCTTCCACCATTTGGCAGAACAGGCCTTCAAATGCAATGCAAGGATTGCTCTTGGATTTCCAAAATAATAATCTTGAAAGCATATCAGGCACTACTGATCTTCCTCCTAACATCACAGTCAGGCTTGAGGGAAATCCTCTTTGTTCCAATAACACTCTAGTTCAGCTCTGTGGATCTGCAAGTGCCAATGACACAAACAGCTCGAGATTAACAGACTCCAGTGTTAACTGTCCCCCTCAATCATGCCCTCCTCCTTATGAATATTCCAAAACATCTTCTGTAAAGTGTTTCTGTGCAGCGCCATTGCTCATTGGTTATCGATTAAAAAGTCCTGGATTTTACGATTTTGATCCATACCAGACAGATTTTGCTAACGTCCTGGCATCCAATTATAGTTTAATGAATAACCAGGTTGATATTGGCACCCCTGAAAGGCAAGGACTTCGACTGAGAATGTACTTGAAGCTTTTTCCGGAATCCATCGATGACAAAAGCCCCCGTACTTTCAATGAAAGCGAGGTTCTGCGTCTTTATAGAATGTTCACAGGATGGGTTGTTTCAGACAATGAATTTTTCGGACCTTATGAACTGCTCAACTTCACTCTGGGTCCTTACGAGGATATGTTGATTGGCCCCAGTACAAGTTCAGGGATAAGCAAGGGCGCACTGGCCGGCATTATCTTAGGGACAATTGCCGGTGCAGTTACGTTATCTGCAATTGTGACTCTTCTTATCTTGAGGTCGCGGATGAGAGATTGCCATGCACTTTCATCAAAGCGACATTTTTCTAGAATAAAAATTGATGGTGTGCGGAGCTTCACTTATGAAGAAATGGCTTTGGCTACTAACAATTTTAGCGACTCCAGTCAAGCTGGCCAAGGGGGCTATGGGAAAGTTTATAGAGGTATTCTCACGGATGGCACTGTTGTAGCGATAAAACGTGCACAGGTGGGATCACTGCAAGGTGAGAGGGAGTTCCTAACTGAAATACAATTACTATCAAGGTTACATCATCGCAACCTCGTGACTTTGATTGGATACTGTGATGAAGGAGCTAATTCGAGAAAACCTCTGAGTTTTGATATGAGATTGAGGATAGCACTAGGGTCAGCCAAGGGCATCCTGTATCTACATACGGAAGCTGATCCTCCAATATTCCACCGAGATGTCAAGGCCAGCAACATACTATTGGACTCCAGGTTCAATGCAAAAGTTGCTGATTTTGGACTTTCACGGCTTGCTCCAGTTCCAGATACTGAAGGAATTGTGCCTGGTCATGTATCTACAGTGGTGAAGGGAACCCCCGTTACTGTGGCATACCAATCAGGTGAAGTTTTCTCGGGGATTGATGGACTTATGGGGCCCTATCCTTCTGAGCACTTGCAGAAGTTCTTGAGCCTGGCCCTCAAGTGTAGCCAAGACGAGCCAGATGCACGACCTAAAATGGCACAAGTGGTTCGAGAGCTTGAAAACATGTGGTCCATGATCGAGTCCAATGCCAAGATACCTGAATATATATCCAGTGATTCTGGGAAATTATTCAGTTCACCATCTTCCTCCTCTGTGAGCCAAACTCCTATTGTATCTTCGTCCTCCATGAGCAAAACTCCTTTTATATCGCGAGATACGTCTGTTAGCGAACTTGTTAGTGGAGTAGAGCTAACCATCAGGCCAAGGTAG 2877 0.4383 MSKWVPRDVSSTRKPVAEIRSEKKQAFHGTGRQRMMGETWTQGLTRAGLCERGAQDFKVPFVRSKKLLLLGASKLGPNRQPTYSLVKICYSRGFRQARDYFLRLVLEVCVTIRNRTYVCYEVDLAIFTKLGYVSSAIQKLGSSVWPKRSGLKDSVSDPTEVDALKSIKASFIDPDRNLNNWNRGDPCTSKWRGVHCSNRTQADNYLHVKELRLLNLNLFGTLAPGIGNLSHLEILDFMWNNISGSIPKEIGNIKSLKLLLLNGNDLRGQLPEELGYLPNLNRMQIDQNNITGPIPISFANLNKTRHFHMNNNSLTGQIPREFSRLSSIIHLLLDHNKLSGDLPHELSQMPLIRIMYGFLSNVHSDLSNNKLTGTIPSNFSGLPRLQLLSLSNNSLNGSVPSTIWQNRPSNAMQGLLLDFQNNNLESISGTTDLPPNITVRLEGNPLCSNNTLVQLCGSASANDTNSSRLTDSSVNCPPQSCPPPYEYSKTSSVKCFCAAPLLIGYRLKSPGFYDFDPYQTDFANVLASNYSLMNNQVDIGTPERQGLRLRMYLKLFPESIDDKSPRTFNESEVLRLYRMFTGWVVSDNEFFGPYELLNFTLGPYEDMLIGPSTSSGISKGALAGIILGTIAGAVTLSAIVTLLILRSRMRDCHALSSKRHFSRIKIDGVRSFTYEEMALATNNFSDSSQAGQGGYGKVYRGILTDGTVVAIKRAQVGSLQGEREFLTEIQLLSRLHHRNLVTLIGYCDEGANSRKPLSFDMRLRIALGSAKGILYLHTEADPPIFHRDVKASNILLDSRFNAKVADFGLSRLAPVPDTEGIVPGHVSTVVKGTPVTVAYQSGEVFSGIDGLMGPYPSEHLQKFLSLALKCSQDEPDARPKMAQVVRELENMWSMIESNAKIPEYISSDSGKLFSSPSSSSVSQTPIVSSSSMSKTPFISRDTSVSELVSGVELTIRPR 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1074 958 SMART serkin_6 684 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1074 958 PANTHER RECEPTOR-LIKE PROTEIN 55 168 893 - -
Lele04g1074 958 Gene3D Transferase(Phosphotransferase) domain 1 853 903 - -
Lele04g1074 958 ProSitePatterns Serine/Threonine protein kinases active-site signature. 784 796 IPR008271 GO:0004672|GO:0006468
Lele04g1074 958 SUPERFAMILY Protein kinase-like (PK-like) 664 889 IPR011009 -
Lele04g1074 958 Gene3D Ribonuclease Inhibitor 363 447 IPR032675 -
Lele04g1074 958 Pfam Leucine rich repeat N-terminal domain 158 197 IPR013210 -
Lele04g1074 958 Gene3D Phosphorylase Kinase; domain 1 655 751 - -
Lele04g1074 958 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 158 319 - -
Lele04g1074 958 ProSiteProfiles Protein kinase domain profile. 684 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1074 958 Pfam Protein kinase domain 686 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1074 958 Pfam Protein kinase domain 765 827 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1074 958 SUPERFAMILY L domain-like 156 449 - -
Lele04g1074 958 Gene3D Ribonuclease Inhibitor 156 362 IPR032675 -
Lele04g1074 958 FunFam receptor-like protein kinase FERONIA 648 753 - -
Lele04g1074 958 MobiDBLite consensus disorder prediction 914 936 - -
Lele04g1074 958 Pfam Leucine rich repeat 278 338 IPR001611 GO:0005515
Lele04g1074 958 Gene3D Transferase(Phosphotransferase) domain 1 752 852 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1074 Lele-ChrLele04 6741231 6758727 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1074 156 891 Receptor kinase-like Gene Family AT5G01950 47.886 0.0 712
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Lele04g1074 Pkinase 1.3e-09 CL0016