Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1070 ATGAAGTTCTATTCACCTTCATTGCAACCTTTTCTTTTGGTCATTGTCATTCTTTTTCCTCTGGCTATTGCTGACTTAAATTCAGAAAAGCAAGCCCTTCTTAGTTTTGCAAATGCTATCCCCCATCGCCGGAACCTTAAGTGGGATCCATCCACGTCTGTCTGTAAGTCTTGGGTTGGCATCACTTGCAATCCGAATGGCACTTACGTTGTTTCTGTCAGGCTCCCTGGCATTGGACTTGTTGGATCCATCCCAGCTAATACACTTGGAAAGCTTGACAACCTCAGAACTATAAGCCTTAGATCCAACCTACTCAGTGGAAATTTACCTACCGATATTACTTCTCTTCCTTCTCTCCAGTATCTCTACCTCCAGCGTAATAACCTTTCAGGTGATATACCTACCTCATTTTCACCCCAACTAAATGCACTTGATCTGTCTTATAATTCTTTCACCGGTGTAATTCCAGAGACATTACAAAATTTAACAGAACTGACTAGACTATACCTTCAGAACAACTCCCTTTCTGGACAGATACCTAATCTCAATGCCCCTAAGCTCAAGCTTTTGAACTTAAGTTACAACCAGTTGAATGGCTCTATCCCGACAACTCTTCAGAAATTTCCTAATTCATCCTTTGAAGGGAATTCTCTCTTGTGTGGGCAACCTCTAAAACCTTGCGCTTCTGTTGCTCCTACACCTTCTCCTGCCTTACCTCCGGCCCCACCATTGGCTCCAAAAAGACAAAGCTCCAAAAGTAAATTGAGTAAGGTAGCTATCATTGCAACCGCTGTTGGAGGAGCTGTTCTGCTGTTACTTATAGCTCTTGTTATTGTTCTCTGCTGTTTAAAGAAGAAAGATGATGGAACATCAAGTGTAATTAAAGGTAAGGGTCCTAGTGGTGGGAGGGGCGAGAAGCCGAAAGAAGAGTTTGGCAGTGGGGTGCAAGAACCCGAGAAAAACAAGCTGGTTTTCTTCGAGGGCTGTTCTTATAATTTTGACCTTGAGGATTTGCTAAGAGCTTCAGCTGAAGTTCTGGGAAAGGGTAGCTATGGTACTGCATATAAGGCTGTATTGGAGGAGTCTACCACCGTTGTGGTGAAAAGGTTGAAAGAAGTAGTGGTGGGCAAGAGAGACTTTGAACAGCAGATGGAGACTGTCGGAAGGGTTGGGCAGCATCCAAATGTTGTACCCCTCCGTGCTTATTATTATTCAAAGGATGAGAAGCTTTTGGTCTATGACTATATCCCAGGGGGCAACCTATTGACGCTATTGCATGGTAGTAGGTCAGGCAGAAGAGCTCCGTTAGATTGGGATTCCCGACTGAAGGTCTCCCTAGGAGCGGCCCGAGGAATTGCCCACATACATTCTGTTGGGGGTCCAAAATTCTCTCATGGAAATATTAAGTCCTCAAATGTCCTCATCCAAGATAATGAAGCCTGCATTTCTGATTTTGGCTTGACCCCACTTATGAACGTTCCGGCAGCCCCCTCCAGGGCTGCAGGTTATCGTGCTCCCGAGGTGATTGAGATGCGTAAACACACTCATAAATCAGATGTGTACAGCTTTGGTGTCCTCCTTCTGGAAATGCTTACTGGGAAAGCACCTCTCCAGTCACCTGGCCGTGACGATATGGTTGATCTCCCTAGATGGGTCCACTCTGTTGTTAGGGAGGAATGGACGGCTGAGGTTTTCGATGTGGAGCTAATGAGTCATCAGAACATCGAAGAAGAAATGGTTCAAATGCTGCAAATTGCCATGGCCTGCGTGGCGAAGGTGCCGGATATGCGACCCAGCATGGATGATGTAGTGAGGATGATCGAAGAGATCCGGCAATCTGACTCAGAGAACCGGCCGTCTTCAGAAGAGAATAAATCCAAGGATTCCAACGTTCAAACTCCATAA 1905 0.4551 MKFYSPSLQPFLLVIVILFPLAIADLNSEKQALLSFANAIPHRRNLKWDPSTSVCKSWVGITCNPNGTYVVSVRLPGIGLVGSIPANTLGKLDNLRTISLRSNLLSGNLPTDITSLPSLQYLYLQRNNLSGDIPTSFSPQLNALDLSYNSFTGVIPETLQNLTELTRLYLQNNSLSGQIPNLNAPKLKLLNLSYNQLNGSIPTTLQKFPNSSFEGNSLLCGQPLKPCASVAPTPSPALPPAPPLAPKRQSSKSKLSKVAIIATAVGGAVLLLLIALVIVLCCLKKKDDGTSSVIKGKGPSGGRGEKPKEEFGSGVQEPEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMETVGRVGQHPNVVPLRAYYYSKDEKLLVYDYIPGGNLLTLLHGSRSGRRAPLDWDSRLKVSLGAARGIAHIHSVGGPKFSHGNIKSSNVLIQDNEACISDFGLTPLMNVPAAPSRAAGYRAPEVIEMRKHTHKSDVYSFGVLLLEMLTGKAPLQSPGRDDMVDLPRWVHSVVREEWTAEVFDVELMSHQNIEEEMVQMLQIAMACVAKVPDMRPSMDDVVRMIEEIRQSDSENRPSSEENKSKDSNVQTP 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1070 634 Gene3D Ribonuclease Inhibitor 25 182 IPR032675 -
Lele04g1070 634 ProSiteProfiles Protein kinase domain profile. 340 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1070 634 Pfam Protein kinase domain 343 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1070 634 Gene3D Transferase(Phosphotransferase) domain 1 416 633 - -
Lele04g1070 634 Pfam Leucine Rich Repeat 186 208 IPR001611 GO:0005515
Lele04g1070 634 Pfam Leucine rich repeat 124 175 IPR001611 GO:0005515
Lele04g1070 634 FunFam Leucine-rich repeat receptor-like protein kinase 28 138 - -
Lele04g1070 634 SUPERFAMILY Protein kinase-like (PK-like) 344 617 IPR011009 -
Lele04g1070 634 FunFam pollen receptor-like kinase 1 308 415 - -
Lele04g1070 634 PANTHER OS05G0588300 PROTEIN 12 622 - -
Lele04g1070 634 Gene3D Phosphorylase Kinase; domain 1 308 415 - -
Lele04g1070 634 MobiDBLite consensus disorder prediction 609 634 - -
Lele04g1070 634 CDD STKc_IRAK 346 610 - -
Lele04g1070 634 SUPERFAMILY L domain-like 29 227 - -
Lele04g1070 634 MobiDBLite consensus disorder prediction 609 625 - -
Lele04g1070 634 Gene3D Ribonuclease Inhibitor 183 228 IPR032675 -
Lele04g1070 634 MobiDBLite consensus disorder prediction 290 315 - -
Lele04g1070 634 FunFam Leucine-rich repeat receptor-like protein kinase 139 227 - -
Lele04g1070 634 ProSitePatterns Protein kinases ATP-binding region signature. 346 377 IPR017441 GO:0005524
Lele04g1070 634 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 416 622 - -
Lele04g1070 634 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Lele04g1070 634 MobiDBLite consensus disorder prediction 301 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1070 Lele-ChrLele04 6691304 6694019 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1070 3 632 Receptor kinase-like Gene Family AT5G58300 69.545 0.0 874
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele04g1070 Pkinase 4.2e-36 CL0016