Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1068 ATGTCCCTGCACTCTGATCTCCATCTTCACCACCCAGAAACATGCACGACCACGACAAGAAGAAGAAACCATTGCAGGCTCCTCAGAATCATACTCACCGATCACGACGCCACTGATTCTGACTCTGACTCTTCCTCCTCCCGTGAAACCCCACAAAGATCATCAAGTGTCAAGCGCCACGTGACACAGATCACCCTCCATCTTCCTTCCTCCTCCAATTCTCCTTCTTCCCCCTCTTCTCCCCGCACTCCTGCCAGGTCTAACCCGACCCGATTCAGGCTGCCCGCTAGTGCCTCCGCCTCTCGCCACCACAAAAAGTTTAGAGGCGTTCGCCAGAGGCCTTGGGGTCGCTGGGCCGCCGAGATCCGGGACCCGAACAGAAGAAAACGGGTCTGGCTTGGAACCTTTGACACGGCGGAGGAGGCCGCGTCTGAGTACGACAGGGCAGCACTAAAGCTCAAGGGTTCTAGCGCGGTCATCAACTTTCCTAACTCCATCATTACGGAGTATACACCGACGCCGATCGCTGTCGCGGTTGAAAGTCCCAGCACTGAAGGAACGGTCTCGCACTCCGATTCGGTGGCGTCGCCCACTTCTGTGCTCCCATGCGACGGCGATTCGACGGCGTTCGACGATTTCCGTTCCGGGGCCGTGGATGCGTTCGGGTTCGACATTGATGTGCCGCTGAGTTTGCCGGACGAGAATTTGATGTTGTCGAATCAACCGTTTGGGAAAGAGGAGTTCGGCGAATTTGACCTCGACGACTTCTCGACCGTGAAGTGA 783 0.5658 MSLHSDLHLHHPETCTTTTRRRNHCRLLRIILTDHDATDSDSDSSSSRETPQRSSSVKRHVTQITLHLPSSSNSPSSPSSPRTPARSNPTRFRLPASASASRHHKKFRGVRQRPWGRWAAEIRDPNRRKRVWLGTFDTAEEAASEYDRAALKLKGSSAVINFPNSIITEYTPTPIAVAVESPSTEGTVSHSDSVASPTSVLPCDGDSTAFDDFRSGAVDAFGFDIDVPLSLPDENLMLSNQPFGKEEFGEFDLDDFSTVK 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1068 260 PIRSF PTI6 3 260 IPR017392 GO:0003700
Lele04g1068 260 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 24 201 - -
Lele04g1068 260 Gene3D AP2/ERF domain 105 165 IPR036955 GO:0003700|GO:0006355
Lele04g1068 260 SUPERFAMILY DNA-binding domain 106 165 IPR016177 GO:0003677
Lele04g1068 260 SMART rav1_2 106 169 IPR001471 GO:0003700|GO:0006355
Lele04g1068 260 CDD AP2 105 165 IPR001471 GO:0003700|GO:0006355
Lele04g1068 260 MobiDBLite consensus disorder prediction 44 95 - -
Lele04g1068 260 Pfam AP2 domain 106 155 IPR001471 GO:0003700|GO:0006355
Lele04g1068 260 MobiDBLite consensus disorder prediction 36 111 - -
Lele04g1068 260 ProSiteProfiles AP2/ERF domain profile. 106 163 IPR001471 GO:0003700|GO:0006355
Lele04g1068 260 FunFam Ethylene-responsive transcription factor 2 105 164 - -
Lele04g1068 260 PRINTS Ethylene responsive element binding protein signature 129 145 IPR001471 GO:0003700|GO:0006355
Lele04g1068 260 PRINTS Ethylene responsive element binding protein signature 107 118 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1068 Lele-ChrLele04 6680074 6680976 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1068 19 201 AP2-EREBP Transcription Factor Family AT4G27950 42.857 5.03e-38 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele04g1068 AP2 2.8e-16 CL0081