Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele04g1064 | ATGTCGTATGTTCCTCCGCACCTCAGGAGCTCCAGCTCCACTACTGTTGCCTCCAGAATTTCATCTCTCGCTATAGACACCAACGATCACAGCAAGCTTCCCAATTCTCACTTCCACACTTCTCTCACTCCTTCGTCATCCTCCAGCTTCTCCAATTCCTCTAGCCGGAGCTTCGGAGCTCCTCCTCTATCCCGCACTCTCTCCATCCCCGACCCCGTGTTCCCGAACTGGCAACCGTCTGAACGCGTTACTCGTATGAAGCCTGAGCAGATTGAAGAGGTTCGACTGCGGCTTAATCTCGATGTTTCTGTTGCTTCTGACTCTCTTCCTGCACCTGCACCTGCACCAATAGAATCATTTTCAGACATGTGCTTGAACCCAAATATCATGAAGGATATTGCTTATCATGAATACACAAGGCCAACTTCTATCCAGGCACAAGCCATGCCAATTGCTCTTAGTGGAAGGGATCTATTGGGTTGTGCTGAAACTGGCAGTGGAAAAACTGCAGCTTTTACCATTCCTATGATAGAGCATTGCTTGGCTCAACCACCAATTCGGCGTGGTGATGGTCCTTTGGCATTGGTTTTGGCTCCAACTAGGGAGCTTGCTCAACAAATAGAGAAAGAGGTTAAAGCTTTTAGCAGATCACTTGAGTCATTAAAAACTGCAATAGTTGTAGGGGGAACTAACATTGAAAAGCAGAGATCTGAGCTACGAGCAGGAGTTGACATAGTGGTTGCTACCCCTGGAAGATTCATCGATCATTTACAACAAGGCAATACTTCCCTTTCTAGAATTTCTTTGGTTGTTCTGGATGAGGCAGATAGGATGCTTGATATGGGCTTTGAACCACAGATAAGAGAGGTCATGAGAAATCTTCCAGAGAAGCATCAAACATTGTTATTTAGTGCAACTATGCCTGTGGAGATTGAAGCATTAGCAAAGGAGTACTTAGCGAGTCCGGTGCAAGTGAAGGTAGGGAAAGTGAGTAGCCCAACAGCAAACGTTTGTCAAACTCTTGTGAAGGTTTCTGAAAATGAGAAGATTGACCGGCTTCTGGATATGCTTGTTGAGGAGGCGTCACAGGCTGAAAAATGCAGCCGTTCATTTCCATTAACAATTGTGTTTGTGGAGAGGAAGACAAGGTGTGATGAAATTGCTGAAGCATTGGTTGCCCAAGGCTTATCTGCTGTATCTCTTCATGGTGGCCGTAGTCAGAATGAAAGAGAGGCTGCTTTGCATGATTTTCGAAGTGGCTCCACTGACATTTTGGTTGCCACTGATGTTGCATCTCGTGGCTTGGATGTCACAGGAGTGTCACATGTCATCAATTTAGATCTTCCAAAGACCATGGAAGATTATGTACACCGGATTGGCAGGACAGGGCGTGCAGGATCAACGGGCCAGGCGACTTCTTTTTACACTGATCGTGATATGTTCCTTGTCGTAAATATAAGGAAGGCTATAGCCGATGCTGACTCTGGGAATGCTGTGGCTTTTGCAACTGGGAAGGTCGCTAGAAGGAAGGAGAAAGAGGCAGCAGCTGCCCAAAAAGAGGCAAATATAGCTTTGTCCAAGAACTTAGCTTTTGGAACCGCCTCAATCGCTATTGAGGATAAGTATAGGTTCATGATCACCGCGTCAAATGTCAAAAGAGAGGCTCCAAGCTTGAGAAGTTGGACGGGATCGATGGATGATGTCAGAGACTTGGGGAGAAATGACTGTGCGAGGATGCTACAGATGGATGGAGCTGTTTCTATGGAAGTTGTGACTCTGTGCTTGTTTGACCTTTTACACCTTTGTAATTGGCTAGATAGACGCCTAGACTTAGCATAG | 1839 | 0.4617 | MSYVPPHLRSSSSTTVASRISSLAIDTNDHSKLPNSHFHTSLTPSSSSSFSNSSSRSFGAPPLSRTLSIPDPVFPNWQPSERVTRMKPEQIEEVRLRLNLDVSVASDSLPAPAPAPIESFSDMCLNPNIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIEHCLAQPPIRRGDGPLALVLAPTRELAQQIEKEVKAFSRSLESLKTAIVVGGTNIEKQRSELRAGVDIVVATPGRFIDHLQQGNTSLSRISLVVLDEADRMLDMGFEPQIREVMRNLPEKHQTLLFSATMPVEIEALAKEYLASPVQVKVGKVSSPTANVCQTLVKVSENEKIDRLLDMLVEEASQAEKCSRSFPLTIVFVERKTRCDEIAEALVAQGLSAVSLHGGRSQNEREAALHDFRSGSTDILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGQATSFYTDRDMFLVVNIRKAIADADSGNAVAFATGKVARRKEKEAAAAQKEANIALSKNLAFGTASIAIEDKYRFMITASNVKREAPSLRSWTGSMDDVRDLGRNDCARMLQMDGAVSMEVVTLCLFDLLHLCNWLDRRLDLA | 612 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele04g1064 | 612 | MobiDBLite | consensus disorder prediction | 28 | 64 | - | - | |
Lele04g1064 | 612 | ProSitePatterns | DEAD-box subfamily ATP-dependent helicases signature. | 271 | 279 | IPR000629 | - | |
Lele04g1064 | 612 | ProSiteProfiles | DEAD-box RNA helicase Q motif profile. | 118 | 146 | IPR014014 | GO:0003724 | |
Lele04g1064 | 612 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 190 | 487 | IPR027417 | - | |
Lele04g1064 | 612 | Gene3D | - | 76 | 329 | IPR027417 | - | |
Lele04g1064 | 612 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 349 | 507 | IPR001650 | - | |
Lele04g1064 | 612 | PANTHER | ATP-DEPENDENT RNA HELICASE RHLE-RELATED | 114 | 518 | - | - | |
Lele04g1064 | 612 | CDD | SF2_C_DEAD | 339 | 475 | - | - | |
Lele04g1064 | 612 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 149 | 325 | IPR014001 | - | |
Lele04g1064 | 612 | Coils | Coil | 507 | 527 | - | - | |
Lele04g1064 | 612 | Pfam | Helicase conserved C-terminal domain | 349 | 466 | IPR001650 | - | |
Lele04g1064 | 612 | SMART | ultradead3 | 137 | 342 | IPR014001 | - | |
Lele04g1064 | 612 | Gene3D | - | 331 | 525 | IPR027417 | - | |
Lele04g1064 | 612 | SMART | helicmild6 | 385 | 466 | IPR001650 | - | |
Lele04g1064 | 612 | MobiDBLite | consensus disorder prediction | 28 | 62 | - | - | |
Lele04g1064 | 612 | Pfam | DEAD/DEAH box helicase | 142 | 312 | IPR011545 | GO:0003676|GO:0005524 | |
Lele04g1064 | 612 | CDD | DEADc | 129 | 326 | - | - | |
Lele04g1064 | 612 | Coils | Coil | 204 | 224 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele04g1064 | Lele-ChrLele04 | 6640785 | 6646327 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele04g1064 | 118 | 479 | Eukaryotic Initiation Factors Gene Family | AT3G13920 | 36.339 | 4.02e-69 | 228 |