Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1062 ATGGCTATGGTGAGTAATTCTCAAGGCAAAATATCTGGTGGAGCCTTTTCTGACATGGAGTTAGATGGAATAGTATTTTCTTCAAGAGAAATAATCAGAAGCACGGTTTGGTTAGCAGATAATGTATCGTATCCACATCCATTGATAATCTTTTTCAGGGTTTGCGATTACATCGACAAGAATGTATACAGCATAGGAGAGAAATTATTGACAATGAAAGGGAAAGAGCAAGAAGAAGGGAATAAAGAGTTGATACAGTACCTGAAGAGGCTAGAAGGAGAGCTTGGAGAGAAGGCTTATTTTGGAGGGGAGAAGCTAGGGTTTGTGGATGTGGCTCTAGTTCCATTCACCAGCTTCTTCTATACCTACGAGACATTTGGGAATTTAAGCATAGAAGCAGAGTGTCCAAAGATCATAGCATGGGCCAAGAGGTGCATGCAAAGCCAGAGCGTGGCTAAGTCCCTGCCTCACCCTCACAACTTGTATGAATTCGTCATTCAACATAGGAAGAGAAATGGGTTGGAATAA 528 0.4167 MAMVSNSQGKISGGAFSDMELDGIVFSSREIIRSTVWLADNVSYPHPLIIFFRVCDYIDKNVYSIGEKLLTMKGKEQEEGNKELIQYLKRLEGELGEKAYFGGEKLGFVDVALVPFTSFFYTYETFGNLSIEAECPKIIAWAKRCMQSQSVAKSLPHPHNLYEFVIQHRKRNGLE 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1062 175 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 54 163 IPR045073 -
Lele04g1062 175 Gene3D - 53 175 - -
Lele04g1062 175 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 40 174 IPR010987 -
Lele04g1062 175 Pfam Glutathione S-transferase, C-terminal domain 74 148 IPR004046 -
Lele04g1062 175 CDD GST_C_Tau 55 165 IPR045074 GO:0004364|GO:0006749
Lele04g1062 175 FunFam Glutathione S-transferase U20 51 175 - -
Lele04g1062 175 SUPERFAMILY GST C-terminal domain-like 54 171 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1062 Lele-ChrLele04 6615776 6617513 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1062 56 175 Glutathione S-transferase Gene Family AT1G17180 55.000 1.59e-42 139