Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1051 ATGGAAGAAGATGAAGAAACCGGTAAGAAGGACTTTCTTTCTCCCACGAAACATCGATGGCTTCATGCCAAAAGAATGGAGGAAGCCAATAACCTCATGCATTACGTCTATAACCAATCCATGCGTAAGAATGGGCTTGAGGGTGGTTCTGTGAATGTGAGAGTAGCTGCTCAGCATTTCTGCGTGAATGTTATGAAAAAAGTAGTCTTCAATAAAAGGTTCTTGCGAAATGGGGATGGGGATGGAGGGCCTGGTTTCGAGGACGCAGAGCATTTGGGTGCAATGTTCATATTGCTTAATCACTTATACGCCTTCAGTGTTTCTGACTTTGTGCCAAGCTTGAGAAGACTTGACTTAGATGGGTATGAGAGAATAGTGAAGAATGCTTTGAGGAGAGTGAACAAGTATCACGAACCCATCATTGAGTCAAGAATCAAACAGTGGAACGGTGGTATCAACACTGAAACTGAGGATTTGCTTGATGTCATGATTTCACTCAAAGATGCCAATAATAACTCCCTGTTCACCACGCAGGAAATTAAAGCCCTAATTTTGCCTCAAGTAGTGGTCAAGAGCTATCTAGCTGAACCTATCAGGCCTCTTGCTGCTAATCACCCTGGCACTTATATAGCTGGTGGTGGTTTATCAGTTGAAACGGGCAGATTGCTGAAGAAGTGGCATGCTCATTATAGGGCTGTAACTTGCCTAGCATTTTCTGGGGATGACTCACTACAGATATCTGGTTCAGAAGATGGATGCACAAGAGTTTGGATATTTGATGATTTGAAAAGGCGGGAAGCAGGTCATCTTTATGAGCATAGTTTTTCAGAGCACACCTTACCAGTAACTGACATTGTAATTGGTTATGGAGGAAGCAATGCAATTATAATTTCTGCTGCAGAGGATAGGACCTGTAAGGTTTGGAGCTTATCTAGAGGAACACTACTAAGAAATTTAGTATTCCCTTCAATAATTGATGCAATTGCGTTGGATACTGCTGAAAATGTCTTTTATGCTGGCAGTAGAGATGGAAAAATATTTATTGCCGCTCTTAACACTGAAAGAATCTTTAATCATAATCATGAGATGCATATCATCGGTTCATTCCCTAATCACAGCAAAGCAGTAACTTGCTTAACACATTGTGCAAGTGAGAATTTGTTAGTCTCTGGATCAGAAGATGGAATGGTTCGTGTTTGGAATCCAAAAACTCGCAATTTTGTCCGTATGTTCAAACATGCAAAAGATGAAGATTCAGATGTTAAGACCATTGTTAGCCTCCCCGATGGCAGGAGCGGCGTGGATGTTTCATACATGTCTTCTCAGGCCATATTTAATCAAATCAAGGAATTTCAGAATCGGGGCTCTTCTGCTTCTGAACTGGAGATGGAGAGGCTAAAAGCAGATTGCAAGAGGTCCGTCCAGATGGTTGATCGATTTAAGAAAATGTATGAAGATCTGCAAGAGTTCTGTAAAGACGACTTCTTGAAAAGTGGTCAAACGAAAACTTCAGATGAAACTGGCAACTAG 1530 0.4137 MEEDEETGKKDFLSPTKHRWLHAKRMEEANNLMHYVYNQSMRKNGLEGGSVNVRVAAQHFCVNVMKKVVFNKRFLRNGDGDGGPGFEDAEHLGAMFILLNHLYAFSVSDFVPSLRRLDLDGYERIVKNALRRVNKYHEPIIESRIKQWNGGINTETEDLLDVMISLKDANNNSLFTTQEIKALILPQVVVKSYLAEPIRPLAANHPGTYIAGGGLSVETGRLLKKWHAHYRAVTCLAFSGDDSLQISGSEDGCTRVWIFDDLKRREAGHLYEHSFSEHTLPVTDIVIGYGGSNAIIISAAEDRTCKVWSLSRGTLLRNLVFPSIIDAIALDTAENVFYAGSRDGKIFIAALNTERIFNHNHEMHIIGSFPNHSKAVTCLTHCASENLLVSGSEDGMVRVWNPKTRNFVRMFKHAKDEDSDVKTIVSLPDGRSGVDVSYMSSQAIFNQIKEFQNRGSSASELEMERLKADCKRSVQMVDRFKKMYEDLQEFCKDDFLKSGQTKTSDETGN 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1051 509 Pfam WD domain, G-beta repeat 366 401 IPR001680 GO:0005515
Lele04g1051 509 Pfam WD domain, G-beta repeat 221 257 IPR001680 GO:0005515
Lele04g1051 509 Pfam WD domain, G-beta repeat 273 309 IPR001680 GO:0005515
Lele04g1051 509 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 226 257 - -
Lele04g1051 509 Pfam Cytochrome P450 25 185 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele04g1051 509 SUPERFAMILY WD40 repeat-like 197 430 IPR036322 GO:0005515
Lele04g1051 509 SMART WD40_4 268 309 IPR001680 GO:0005515
Lele04g1051 509 SMART WD40_4 362 401 IPR001680 GO:0005515
Lele04g1051 509 SMART WD40_4 219 258 IPR001680 GO:0005515
Lele04g1051 509 SMART WD40_4 312 350 IPR001680 GO:0005515
Lele04g1051 509 SUPERFAMILY Cytochrome P450 12 185 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele04g1051 509 Gene3D - 195 467 IPR015943 GO:0005515
Lele04g1051 509 ProSiteProfiles Trp-Asp (WD) repeats profile. 226 257 IPR001680 GO:0005515
Lele04g1051 509 PANTHER WD-REPEAT PROTEIN 18 168 426 IPR045227 -
Lele04g1051 509 ProSiteProfiles Trp-Asp (WD) repeats profile. 275 318 IPR001680 GO:0005515
Lele04g1051 509 Gene3D Cytochrome P450 9 189 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele04g1051 509 ProSiteProfiles Trp-Asp (WD) repeats profile. 369 410 IPR001680 GO:0005515
Lele04g1051 509 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 369 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1051 Lele-ChrLele04 6519869 6527289 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1051 11 184 Cytochrome P450 AT4G39950 46.286 6.85e-45 164