Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1036 ATGTATGGCAGTAAAGAGCATACGGATGATATTAAAGGAGACCACGGTTATGTGGAAACTGACCCGAGTGGTCGCTATGGCAGGTTTGGAGACATTCTTGGAAAAGGAGCAATGAAGACAGTATACAAAGCTATTGATGAGGTCCTTGGAATAGAGGTAGCATGGAACCAGGTCAGACTCAATGAGGCACTTCGCACACCAGATGATTTGCAGCGGCTTTACTCAGAGGTTCATCTTCTCAGTACCCTCAAGCACCAATGCATCATAAGATTCTACACCTCCTGGATCGATGTTGATAAAAAGACCTTCAACTTTATCACAGAAATGTTCACTTCAGGGACACTGAGAGAATATAGGAAGAAATATATGCAAGTTGGCATACAAGCAATAAAGAATTGGGCTCGCCAAATCTTACAAGGTCTTGTTTACCTACATGACCATGATCCTCCGGTAATTCATAGGGACCTCAAATGTGATAACGTATTTGTCAACGGCCATCTTGGACAAGTGAAAATCGGTGATTTAGGACTAGCAGCTATTCTCCGTGGTTCCCAGTTTGCCCACAGTGTTATAGGCACCCCAGAGTTCATGGCTCCAGAATTATATGAAGAAGAATACAATGAACTTGTTGATGTGTACTCGTTTGGCATGTGTGTTTTAGAAATGCTTACATCTGAATATCCATATGGTGAATGTGCTAATCCTGCACAGATCTACAAAAAAGTAACATCGGGAAAGCTACCTGCAGCACTTTTTCGGATTGAAGAAGCAGAAGCACAGAAGTTTGTTAGAAAATGCTTGGCAGCTGCAGCAGAAAGACCATCAGCTAAAGAATTATTGCTTGATCCTTTTCTTTCATCTAATGACGCATTATCAAATAGAAAGTTTGATATTCAAAAGCCACTCTTGAATGACATTGAGATAGAAAAGTTGCATTTGACCGATGGTTCACACAGGACTGGGATGAAAATCACTGGGAAGCTGAACCCGGAGGACGATACAATATTTCTCAAAGTGCAAATTACTGATAAAAATGGTTCTGCAAGGAACATTTATTTTCCCTTTGACATTTTAACGGATACTCCCATTGATGTTGCGATGGAGATGGTGAAAGAGTTGGAGATCACTGATTGGGAGCCAATTGAAATTTCTAGTATGATTGAAGCAGAGATATCTGCTCTGCTGCCACAGGGGAGGAAGAGGGACTGTTTGGATACCTTTCATATGTTCAATTATCAGAATGATGACAACAATGAACATCAATATCATTTTGGCTCATTATCATCTTGTTCATCATTACAAGAATCAGTATCAGCCATAGTTTCAAAAGCTGAGGAACTACCCAATGGATATTACTGGCTCAATGATGACTTGATTGACGATTCCAGTTCCCGATGCTCTTCACAGGGGACATATTCTAACTTGAATTATGTTTCTGCGGATGACCAGGAGTACAATGTGACTCATACAAGAAAAGATAAACAACCAATCACTAAGAGTCACAAATGTAAAATGTTTTCCCCTGGTGAAGACCTAAGCATTGGGTTGTCTCCGTTTGGAACAAGTTGCAACTACTGTAAAGTTTTAGTGGGACCACATGCTACCGCATCTACTAGTAAAAACAAGAAGATAGACAATCGTTGCTTGACAAGGAACAATTCATTTATTGATGTACGTAGCCAAATGCTACACCGTTCCCTAGTTGAGGAGGTAAGCAAGAGACGCTTATTCAAGACAGTTGGAGCTGTGGAAAATATTGGATTTCAGAATCCTCTTGAGGCTCCCAGGAAAAAATCACAACCACTGTTTGGTGCTTTAGATGTGAAATCTTCAAAGAGCGGCAAAGGACAAGGACTTAGGAGTTATTCTTTGAACATCAGAAGTGAAAGAGATAGATAG 1899 0.4049 MYGSKEHTDDIKGDHGYVETDPSGRYGRFGDILGKGAMKTVYKAIDEVLGIEVAWNQVRLNEALRTPDDLQRLYSEVHLLSTLKHQCIIRFYTSWIDVDKKTFNFITEMFTSGTLREYRKKYMQVGIQAIKNWARQILQGLVYLHDHDPPVIHRDLKCDNVFVNGHLGQVKIGDLGLAAILRGSQFAHSVIGTPEFMAPELYEEEYNELVDVYSFGMCVLEMLTSEYPYGECANPAQIYKKVTSGKLPAALFRIEEAEAQKFVRKCLAAAAERPSAKELLLDPFLSSNDALSNRKFDIQKPLLNDIEIEKLHLTDGSHRTGMKITGKLNPEDDTIFLKVQITDKNGSARNIYFPFDILTDTPIDVAMEMVKELEITDWEPIEISSMIEAEISALLPQGRKRDCLDTFHMFNYQNDDNNEHQYHFGSLSSCSSLQESVSAIVSKAEELPNGYYWLNDDLIDDSSSRCSSQGTYSNLNYVSADDQEYNVTHTRKDKQPITKSHKCKMFSPGEDLSIGLSPFGTSCNYCKVLVGPHATASTSKNKKIDNRCLTRNNSFIDVRSQMLHRSLVEEVSKRRLFKTVGAVENIGFQNPLEAPRKKSQPLFGALDVKSSKSGKGQGLRSYSLNIRSERDR 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1036 632 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Lele04g1036 632 MobiDBLite consensus disorder prediction 603 632 - -
Lele04g1036 632 Gene3D - 320 403 - -
Lele04g1036 632 Gene3D Transferase(Phosphotransferase) domain 1 110 293 - -
Lele04g1036 632 FunFam probable serine/threonine-protein kinase WNK9 110 290 - -
Lele04g1036 632 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1036 632 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 14 468 - -
Lele04g1036 632 FunFam Probable serine/threonine-protein kinase WNK1 12 108 - -
Lele04g1036 632 CDD STKc_WNK 25 285 - -
Lele04g1036 632 Pfam Protein kinase domain 31 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1036 632 SUPERFAMILY Protein kinase-like (PK-like) 29 305 IPR011009 -
Lele04g1036 632 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1036 632 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1036 Lele-ChrLele04 6416962 6420838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1036 17 597 MAP Kinase Kinase Kinase AT5G58350 56.388 0.0 627
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lele04g1036 Pkinase 6.4e-47 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g1036 04 6416962 6420838 Lele04g1036 04 6416962 6420838 ECH
Lele01g1034 01 5977722 5981362 Lele04g1036 04 6416962 6420838 hybridization
Lele02g1046 02 6454772 6458618 Lele04g1036 04 6416962 6420838 hybridization