Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1035 ATGGGTAATCACAGGTTCAAATTGTCAGATATGATACCAAATGCTTGGTTTTACAAACTCAGAGACATGAGCAGATCAAGGAAGCAGAAAGGTTCTCATGCTGTGAAGAACAAAGCAAGCTCACCAGTAATGTCCCAGAGGTCGCCCCCAAATTGTTTGCATTATTTCCCCACAGAACCTTACAAAGCTGGTATGCTTTTCAACTCACCAATTCACACCAAAGTCACAGACTTTTCATTCACTGTTTCTCCAAGAAGGTCATCCAAGAGAAGAGCTCAGAGGAAAACTATTTACAAGCCTTCTCCTTCAGTTGTGTCCTCTGTCTCAACCGCTTACAACTGCCATTGTACTCATCAGCCAAATAAAGCCGAGTCTCCGGATTTCTATGCTTCTTCCATTGAGAGTTCTTCCTCTGAGTTAGATCTCTATGAATGTATTACATCTGAGTCTGATGAGTGTGATAGCTTAGCAGCTCCTCACATGGTCAATGGACTATCCCCTGATTGCAGTTGCAGGGTTAGTTCTTCCACTAATGATATCATCATAGACATGAACAACGAATCATTTGCTGTGAATACTGAAAAGCTTGATGGTTTTGATACAATTTCGAAATTAGGCCTTCCTCCTATAGTGACAAAACCAGCGAGGTTTGATGATCAGGTCATTGAAGCACATTACTTGAAATGTTCATCGCAGGTGGAGGAAAGCAGCAGAACTACGACTCCAAAGTCCTCTGGTAATTCAACAGGAATAAGACTTAGAGTCAATTCTGCAAAACTTGCAAGTAGGAAAGTTCAAGCCTGTACAAGAAGGAGTGTATCGTCATCATCATCATCATCCAGTGCATGCAAGGTTTCAAGGAACACAAAAGGATTTCCAGAAGGTTTTGCAGTTGTCAAGTCCTCAATTGATCCACAAAGAGATTTCAAGGAGTCAATGGTGGAGATGATCAGGGAGAACAGTATATGGTCATCAGAGGATTTTGAGGATCTTCTAGCTTGTTATCTCTCACTTAACTCAAGAGAATACCATGAACTCATAATCAAAGCATTTGAGCAAACTTGGTTTGACTTGGCTCAACTCAGAATGTAA 1092 0.4112 MGNHRFKLSDMIPNAWFYKLRDMSRSRKQKGSHAVKNKASSPVMSQRSPPNCLHYFPTEPYKAGMLFNSPIHTKVTDFSFTVSPRRSSKRRAQRKTIYKPSPSVVSSVSTAYNCHCTHQPNKAESPDFYASSIESSSSELDLYECITSESDECDSLAAPHMVNGLSPDCSCRVSSSTNDIIIDMNNESFAVNTEKLDGFDTISKLGLPPIVTKPARFDDQVIEAHYLKCSSQVEESSRTTTPKSSGNSTGIRLRVNSAKLASRKVQACTRRSVSSSSSSSSACKVSRNTKGFPEGFAVVKSSIDPQRDFKESMVEMIRENSIWSSEDFEDLLACYLSLNSREYHELIIKAFEQTWFDLAQLRM 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1035 363 Pfam Transcriptional repressor, ovate 302 358 IPR006458 -
Lele04g1035 363 Pfam DNA-binding domain 1 41 IPR025830 GO:0003677
Lele04g1035 363 MobiDBLite consensus disorder prediction 27 48 - -
Lele04g1035 363 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 113 359 IPR038933 GO:0045892
Lele04g1035 363 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 296 359 IPR006458 -
Lele04g1035 363 ProSiteProfiles OVATE domain profile. 298 357 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1035 Lele-ChrLele04 6414335 6415426 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lele04g1035 Ovate 3.7e-23 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g1035 04 6414335 6415426 Lele04g1035 04 6414335 6415426 ECH
Lele01g1033 01 5975069 5976157 Lele04g1035 04 6414335 6415426 hybridization
Lele02g1045 02 6447311 6448396 Lele04g1035 04 6414335 6415426 hybridization