Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele04g1034 | ATGCCAGAGATCGAACCCGTGCTGGCGAACAACAACGCCTTGTTCGGCAAATATGAGCTCGGAAGGCTTTTGGGTTGTGGAGCCTTCGCAAAGGTCTACTTTGCCCGCAATGTCCAGAACGGCCAGAGCGTCGCCATTAAGGTCATCAACAAGAAGAAGATATGTGGCACCGGGCTCATGTCTAATATCAAGCGTGAAATTACCATCACGAGTCGCCTCCATCACCCCAATATCGTCAAGCTCCAAGAGGTCTTAGCCACCAAGACAAAGATCTACTTCGTCATGGAGTTGGTCAAGGGAGGCGAATTGTTTGCCAAGATCTCCAAGGGACGCTTCAGCGAGGACCTCAGCCGGAAGTATTTCCAGCAGTTGATATCAGCCGTCGGGTACTGCCACTCCCGCGGGGTATACCACCGTGACTTGAAACCCGAGAATCTCTTGCTCGACGAGAATGGGAACCTGAAGGTTTCGGATTTCGGACTCAGCGCCGTAAAAGATCAGATTCGAACCGATGGGTTGCTCCACACTCTTTGTGGCACTCCGGCTTACGTTGCACCGGAGGTTTTGGCCAAGAAAGGCTACGATGGAGCGAAGGTGGATGTGTGGTCCTGTGGCGTTATCCTCTTCGTATTGACAGCTGGATACCTACCGTTCAACGACCCGAACCTCATTAACATGTACAAGAAGATATACAGAGGCGAATATCGGTGTCCCCGGTGGATGTCGCCCGACCTCCGGCGTTTTCTATGGAGGCTTCTGGACACCAACCCGGATACCAGAATCACCATCGACGAGATCCTCCGGGACCCGTGGTTCAAGAAAGGGTACAAGGAGGTGAAATTTCACGAGGAACACGTCGGGTCTTCATCAGGGACGAAGCCAGATGAGGTGGATCAGAAGATGACTGTTCTGAACGCATTCAGTATCATCTCGTTCTCCTCCGGTTTGAACCTGTCAGGTTTGTTTGATGACCCGCACGACACAACTGAGGGAACCGAGCGGTTCGTGTTGGCGGCATCACCGGAGAAGCTGATGGAGAGTGTGGAGGAGATCGCCAAGGTGGAGAAACTCGGGGTGAGAAGGAAGAAGGAGTTCGGGGTGGAGCTGGAGGGGCAGAAAGGAAATTTCGGGATTACTGTTGTTTTTTACCGTTTAATGGAAAGCCTGGTATTAGTGGAGGCACAAAGAAGAGGCAGAGACGGTGTGGACTTGTGGAAGGACAAGCTTAAGCCTCAGCTCAGGGCTACTACAGGTCAAGAAACAGATTCCCAGGTTGCCCGGTGA | 1284 | 0.5241 | MPEIEPVLANNNALFGKYELGRLLGCGAFAKVYFARNVQNGQSVAIKVINKKKICGTGLMSNIKREITITSRLHHPNIVKLQEVLATKTKIYFVMELVKGGELFAKISKGRFSEDLSRKYFQQLISAVGYCHSRGVYHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEVLAKKGYDGAKVDVWSCGVILFVLTAGYLPFNDPNLINMYKKIYRGEYRCPRWMSPDLRRFLWRLLDTNPDTRITIDEILRDPWFKKGYKEVKFHEEHVGSSSGTKPDEVDQKMTVLNAFSIISFSSGLNLSGLFDDPHDTTEGTERFVLAASPEKLMESVEEIAKVEKLGVRRKKEFGVELEGQKGNFGITVVFYRLMESLVLVEAQRRGRDGVDLWKDKLKPQLRATTGQETDSQVAR | 427 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele04g1034 | 427 | Pfam | Protein kinase domain | 18 | 272 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Lele04g1034 | 427 | Pfam | NAF domain | 302 | 360 | IPR004041 | GO:0007165 | |
| Lele04g1034 | 427 | Gene3D | Transferase(Phosphotransferase) domain 1 | 98 | 279 | - | - | |
| Lele04g1034 | 427 | ProSiteProfiles | NAF domain profile. | 299 | 323 | IPR018451 | GO:0007165 | |
| Lele04g1034 | 427 | Gene3D | Kinase associated domain 1, KA1 | 300 | 417 | - | - | |
| Lele04g1034 | 427 | SUPERFAMILY | Protein kinase-like (PK-like) | 15 | 294 | IPR011009 | - | |
| Lele04g1034 | 427 | ProSiteProfiles | Protein kinase domain profile. | 18 | 272 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Lele04g1034 | 427 | CDD | CIPK_C | 305 | 414 | - | - | |
| Lele04g1034 | 427 | FunFam | Non-specific serine/threonine protein kinase | 9 | 304 | - | - | |
| Lele04g1034 | 427 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 136 | 148 | IPR008271 | GO:0004672|GO:0006468 | |
| Lele04g1034 | 427 | Gene3D | Phosphorylase Kinase; domain 1 | 7 | 97 | - | - | |
| Lele04g1034 | 427 | SMART | serkin_6 | 18 | 272 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Lele04g1034 | 427 | FunFam | Non-specific serine/threonine protein kinase | 9 | 97 | - | - | |
| Lele04g1034 | 427 | ProSitePatterns | Protein kinases ATP-binding region signature. | 24 | 47 | IPR017441 | GO:0005524 | |
| Lele04g1034 | 427 | PANTHER | CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED | 11 | 397 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele04g1034 | Lele-ChrLele04 | 6395508 | 6396791 | Dispersed/Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele04g1034 | 1 | 426 | CBL-interacting serine-threonine protein kinases | AT2G30360 | 64.302 | 0.0 | 566 |
Transcription factors information