Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1030 ATGGAGAACAGATCAAGTATTTTAATGGGAAGATATGAATTAGGAAGATTGCTAGGCCAAGGTACCTTTGGAAAAGTTTACTATGCACGAAGCACCTCAACTAACCAGAGTGTGGCTGTTAAGGTAATTGACAAAGATAAGGTTCTGAAATCTGGGCAAGCTGAACACATCAAGCGTGAAATATCTATTATGAGGAAGGTTAGACATCCCTATATTATACAGCTTTTTGAGGTTATGGCCACCAAGAGTAAGATTTACTTTGTTATGGAATATGCTAAAGGTGGTGAACTCTTCACCAAGTTAGCTAAAAATGGAAAGCTCAAAGAGGAGGTTGCACATAAATATTTCTGGCAGCTGATCAATGCAGTTGAATTTTGTCACAGCAGAGGCGTGTACCACCGGGATATTAAACCAGAGAACCTTTTGTTGGATGAAAATCGGAATCTGAAGGTTTCTGATTTCGGGTTAAGTGCTCTGGTGGAATCCAAGCGGGAAGATGGCCTGCTGCATACAACTTGTGGCACACCCGCATATGTTGCTCCTGAAGTCATCAAAAGGAAAGGGTATGATGGAGCCAAAGCTGATGTTTGGTGTTGTGGGGTAGTATTGTTTGTATTATTGGCAGGTTATCTCCCTTTTCATGATCCAAATTTGGTAGAGATGTATAGGAAGATTGGCAAAGCAGAATTTGAATGTCCTGACTGGTTCTCCCCAGAAGTTCGCAAACTTTTAAGCAAGATGTTAGATCCAGATCCTGATACTAGGATTTCCATGGAAAAGATTAGGGAGTGTTCTTGGTTTAAGAAAGGACCAGATTCTAAACATAAAAAACCTGTCGTGGAAAAGAAGGCTGTCTCTTCATCAGGTAAAATTCCTTCCGATCAAAGTGATGAAGCAGAAGCAAAGCAGGAGTCAGTTGTACCAATCAGTATAAATGCATTTGATATCATATCCCTTTCTTCTGGCTTTGATCTTTCTGGATTCTTTGAAGACAGTTTTAAGAAGAGAGAAGCTAGATTTACCTCAAGACAACCTGCACCGGCTATCATCTCGAAGCTGGAAGAAACTGCTAAGCGTCTGAAGATGAAAATAAAGAAAAAAGCCGCAGGTTTGTTAAAGCTAGAGGGCCTCAAAGCAGGCAGAAAGGGTATTTTGTCCATTGATGCAGAGATCTTTGAGGTTACTCCGTATTTCCATCTGGTGGAGGTGAAAAAATCAGATGGAGATACATTGGAATTTCAGAAAATACTGAAAGAAGGTATAAGGCCTGCTCTTCAGGATATTGTCTGGGTTTGGCAAGGTGATGACCAAGAACAGCAATCACAGCAACAACTGCAGATACATGATCCGCAGCCACAACAATCACAGCAATGA 1374 0.409 MENRSSILMGRYELGRLLGQGTFGKVYYARSTSTNQSVAVKVIDKDKVLKSGQAEHIKREISIMRKVRHPYIIQLFEVMATKSKIYFVMEYAKGGELFTKLAKNGKLKEEVAHKYFWQLINAVEFCHSRGVYHRDIKPENLLLDENRNLKVSDFGLSALVESKREDGLLHTTCGTPAYVAPEVIKRKGYDGAKADVWCCGVVLFVLLAGYLPFHDPNLVEMYRKIGKAEFECPDWFSPEVRKLLSKMLDPDPDTRISMEKIRECSWFKKGPDSKHKKPVVEKKAVSSSGKIPSDQSDEAEAKQESVVPISINAFDIISLSSGFDLSGFFEDSFKKREARFTSRQPAPAIISKLEETAKRLKMKIKKKAAGLLKLEGLKAGRKGILSIDAEIFEVTPYFHLVEVKKSDGDTLEFQKILKEGIRPALQDIVWVWQGDDQEQQSQQQLQIHDPQPQQSQQ 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1030 457 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Lele04g1030 457 MobiDBLite consensus disorder prediction 269 301 - -
Lele04g1030 457 Pfam Protein kinase domain 12 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1030 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Lele04g1030 457 SMART serkin_6 12 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1030 457 ProSiteProfiles Protein kinase domain profile. 12 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1030 457 Gene3D Kinase associated domain 1, KA1 314 431 - -
Lele04g1030 457 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Lele04g1030 457 CDD STKc_SnRK3 11 266 - -
Lele04g1030 457 FunFam Non-specific serine/threonine protein kinase 306 430 - -
Lele04g1030 457 Pfam NAF domain 308 366 IPR004041 GO:0007165
Lele04g1030 457 Gene3D Transferase(Phosphotransferase) domain 1 4 313 - -
Lele04g1030 457 FunFam Non-specific serine/threonine protein kinase 2 296 - -
Lele04g1030 457 MobiDBLite consensus disorder prediction 269 283 - -
Lele04g1030 457 SUPERFAMILY Protein kinase-like (PK-like) 8 306 IPR011009 -
Lele04g1030 457 ProSiteProfiles NAF domain profile. 306 330 IPR018451 GO:0007165
Lele04g1030 457 CDD CIPK_C 312 426 - -
Lele04g1030 457 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 5 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1030 Lele-ChrLele04 6383909 6385282 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1030 1 441 CBL-interacting serine-threonine protein kinases AT5G58380 65.939 0.0 628
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele04g1030 Pkinase 1e-77 CL0016