Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1029 ATGAGGAGTCCGAGAAAGGAGAAGGAGGATGATGAAGATCCGTACGATGCGCCTGGTTCGGGTATGTGCTTCGATGTTAATTCTGTTGCTTCTTGTTTCTTCCACTTGAAAACTTCCAGTGACAAATACAAGCCAACCTTCAAGAGTCTGACATTGACCTTCAAGAAATACTTCCACACCTGTTTGTGTTTTTGCCTCAAAGCAAAGTTCTTCCTTCTTACAGCTCCAACACACAGATCAACACAATCAAGAGGCATGCTTGGATGTCCAGAAACAGAAAGAGCAGAAGAGATAGCCAAGAACACAGCAGAGGCTGTAGAAGCTTCTTGTCAAATGGGAAGGAGGAATTTCTATGGACCAGAAGTTTCAGGGACAACCTTAAACACTGTAACTCCTTGTGCTGCATGTAAGCTTCTGAGAAGAAGATGTGCTGAAGAATGCCCTTTCTCTCCTTACTTTTCCCCCCATGAGCCTCAGAAGTTCGCTGCTGTTCATAAAGTGTTCGGTGCAAGCAATATCTCCAAGATGCTAATGGAGGTTCCTGAGAGCCAAAGAGCAGATGCTGCAAACAGTCTGGTTTATGAAGCTAACCTGAGGCTGAGGGACCCAGTTTATGGATGCATGGGTGCAATATCAGCTTTGCAGCAACAAGTTCAGTCATTACAAGCAGAGCTAAATGCTTTAAGATCTGAGATTCTGAAGTACAAATACAGAGAAGCTGCAAGTCAGATCATTTCTTCTCATGGTGGGGCTTTGGTTTCTTCTGTGGAGGATACTATTTCTGCAGAATCACAACAACAAGGTCTTGTTCATCAGCCTCAACCTCCTCCTCCTCCTCCAAAACCATCATTACCTTCTTCTGCTTCTGTTAATGTTCTTTCAACCCTGTCTTCATCTTCCAGTTCTTCCGTATACGCACCCCCTAAGAGCACAATCATCCATGGATCTATCTCCAGCGAAAATGTCCCTTACTTTGTTTAA 981 0.4404 MRSPRKEKEDDEDPYDAPGSGMCFDVNSVASCFFHLKTSSDKYKPTFKSLTLTFKKYFHTCLCFCLKAKFFLLTAPTHRSTQSRGMLGCPETERAEEIAKNTAEAVEASCQMGRRNFYGPEVSGTTLNTVTPCAACKLLRRRCAEECPFSPYFSPHEPQKFAAVHKVFGASNISKMLMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISALQQQVQSLQAELNALRSEILKYKYREAASQIISSHGGALVSSVEDTISAESQQQGLVHQPQPPPPPPKPSLPSSASVNVLSTLSSSSSSSVYAPPKSTIIHGSISSENVPYFV 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1029 326 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 128 274 - -
Lele04g1029 326 Coils Coil 211 238 - -
Lele04g1029 326 MobiDBLite consensus disorder prediction 271 285 - -
Lele04g1029 326 MobiDBLite consensus disorder prediction 263 290 - -
Lele04g1029 326 Pfam Lateral organ boundaries (LOB) domain 132 228 IPR004883 -
Lele04g1029 326 ProSiteProfiles LOB domain profile. 131 232 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1029 Lele-ChrLele04 6375647 6379331 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1029 93 242 AS2 family AT2G30340 72.368 6.06e-72 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele04g1029 LOB 1e-40 No_clan