Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1019 ATGGTTTCGTTCAGAGGTGATGACAAGAGAAGAGCCATGTATAGGAACCAACAATTGCTTCGTTCAATCATCAAGTCCCACCAGATCAAAACCTGGTTTGTGCAGCAGAAGCGTAAAGCCTCATCATCTTCATCAGTAACATTAGATGCGTCAGTGTACATACAATCACTGATTAATCAAGCAGTTTCTGCATCACAAAAACTCATCGACAACGATCCACTGCCCATGGTTATAGTTGAAGAACGAGAGGAAGGATTTATGATAAAAGTGTGGAGCCAAACAAGTTGCGAGGGGTTGCTGGTGTTCGTATTGGAAGCCATTGAAGAGCTGGGCCTTGATGTTCTGCAAGCTAGGGTTTCTTGTGTCGACAGCTTTTGTTTAGAAGCAGTAATTGGAACCCAAAATTATTTGTGGATTGTAAACCAGAAGGACGAAGAAGATACTGGGCATATGAACGCGCAATTAGTTGAACAAGCAGTGTCTCAAGCTATCCAAAGCTGGAAGGAAGAACTTGAAAATTAA 522 0.4215 MVSFRGDDKRRAMYRNQQLLRSIIKSHQIKTWFVQQKRKASSSSSVTLDASVYIQSLINQAVSASQKLIDNDPLPMVIVEEREEGFMIKVWSQTSCEGLLVFVLEAIEELGLDVLQARVSCVDSFCLEAVIGTQNYLWIVNQKDEEDTGHMNAQLVEQAVSQAIQSWKEELEN 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1019 173 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 10 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1019 Lele-ChrLele04 6316093 6317161 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g1019 04 6316093 6317161 Lele04g1019 04 6316093 6317161 ECH
Lele04g1019 04 6316093 6317161 Lele25g1107 25 7153415 7160410 ECH
Lele04g1019 04 6316093 6317161 Lele26g1107 26 7155072 7156282 ECH
Lele04g1019 04 6316093 6317161 Lele27g0971 27 17498787 17507618 ECH
Lele04g1019 04 6316093 6317161 Lele28g1100 28 7133272 7138483 ECH
Lele03g1016 03 5890967 5892075 Lele04g1019 04 6316093 6317161 ECH
Lele41g0225 41 1839189 1840569 Lele04g1019 04 6316093 6317161 ECH
Lele42g0219 42 1839556 1841011 Lele04g1019 04 6316093 6317161 ECH
Lele43g1139 43 19745146 19746519 Lele04g1019 04 6316093 6317161 ECH
Lele44g1127 44 19894749 19896676 Lele04g1019 04 6316093 6317161 ECH
Lele01g1015 01 5882328 5883424 Lele04g1019 04 6316093 6317161 hybridization
Lele02g1030 02 6343401 6344516 Lele04g1019 04 6316093 6317161 hybridization