Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1017 ATGGCTTCAACTGCTCTTCAATGGCTAAGCCTTGTAGGCATGATTTGGCTCCAAGCATTAAATGGCACAAATACCAATTTCCCTGCCTACTCATCTCAACTGAAACAGCTTCTTTCAATTTCACAAGTGCAGCTCAACAACCTTGCTTTTGCCTCTGATGCAGGAAAACTTCTTGGCTGGTTCTCTGGCATGGCTTCTATTCACCTCCCTCTCTGGCTTGTTCTCCTGATCGGTTCAAGTCTTGGGTTGGTTGGTTATGGAATCCAATATCTCTTCATAACACAACAAATCTCATCTCTCTCCTACTGGCATGTTTTCTTACTAACTGTTCTTGCTGGGAATAGCATTTGTTGGATTAACACGGTCAGTTATGTTATCACCATCAGGAACTTCCCATCCGATCACCAAGTCGCCGTAGGGTTAACAACTAGTTATCAAGGGTTAAGTGCAAAGATCTATAATGATATTGTCCAAGTTCTTTCTCCCCATAAGAAAGCTAGAGCCTTTCTTTTCTTGAACTCTTTGTTGCCTCTCTTAGTGAGCCTCATAGCAACTCCTGTAACTAGAGAAATTCAAGTCACAAGGCCTAAACGAATGCGTGTTGGATTTGTTGTAATGTTTGTTATTACAATTTCCACTGGTGTATATGCTGTTCTTAGCAGCTTGCAGTTTTTGTCTCGCAAATTATCTCCTTTGAGTAATCTGATTGGTATTCTAGTGGCCCTTCTCCTCCCTCTATTACTTCCACTCTCAGAGAAGATCAACGAATTGGTTAGATCATGGCAAGCCAATCGAGAAAGACTAAGAATCTATCACTTCACAGTGGAGGAAAATAACAGTCCTAATGGAGAGAGGACAGAGATCAGTGAGCCAAAAGATGGAGAAGAGGAAGAAGAAGAAGAAGGTAGCAACAGAGGGGCTCAAGAACTTGTTGTCAGAGAAGAAATTGGAGTGAAGTTAATGCTGAGGAGAATAGATTTCTGGTTATATTTTTTAATCTATTTCTTCGGTGCAACAATTGGTTTAGTCTTTATGAACAACTTGGGACAAATTGCAGAGTCCAGAGGCAACTCCAATACTTCATCTCTGGTATCCTTGTCTTCATCTTTTGTGTTCTTTGGCCGTCTCATGCCATCTCTCATGGACTACTTCTGCAGGGGTAGGGTTATGATTTCAAGGCCAGCGAGTATGGCGGCATTAATGGCGCCAACAGCAGGATCGTTCTTGTTGCTTCTCAACAGAACCGAGCTAGCTTTATACACGAGCACTGCCATAATAGGAGTATGCACTGGAGCCATAACTTCCATTTCTGTGTCCACGACCACTGAACTATTTGGGAAAAAGAATTTCTCAGTGAACCACAACGTTGTTGTGGCCAACATTCCCATTGGTTCTTTTGTTTTTGGTTACTTGGCTGCTCTGATTTATCGTAAGGAACAAGATGGAGATGGGAAATGCATTGGTATGGAGTGTTATAGAAGAACTTTCATCATCTGGGGTTCGCTCTGTTTCTTTGGAACATTGTTGGCTTTGATTCTTCATGCCAGAACTCGCAAGTTCTACTCGCAGATGTACAACAGATAG 1584 0.4211 MASTALQWLSLVGMIWLQALNGTNTNFPAYSSQLKQLLSISQVQLNNLAFASDAGKLLGWFSGMASIHLPLWLVLLIGSSLGLVGYGIQYLFITQQISSLSYWHVFLLTVLAGNSICWINTVSYVITIRNFPSDHQVAVGLTTSYQGLSAKIYNDIVQVLSPHKKARAFLFLNSLLPLLVSLIATPVTREIQVTRPKRMRVGFVVMFVITISTGVYAVLSSLQFLSRKLSPLSNLIGILVALLLPLLLPLSEKINELVRSWQANRERLRIYHFTVEENNSPNGERTEISEPKDGEEEEEEEGSNRGAQELVVREEIGVKLMLRRIDFWLYFLIYFFGATIGLVFMNNLGQIAESRGNSNTSSLVSLSSSFVFFGRLMPSLMDYFCRGRVMISRPASMAALMAPTAGSFLLLLNRTELALYTSTAIIGVCTGAITSISVSTTTELFGKKNFSVNHNVVVANIPIGSFVFGYLAALIYRKEQDGDGKCIGMECYRRTFIIWGSLCFFGTLLALILHARTRKFYSQMYNR 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1017 527 MobiDBLite consensus disorder prediction 279 306 - -
Lele04g1017 527 Pfam Nodulin-like 7 249 IPR010658 -
Lele04g1017 527 Gene3D MFS general substrate transporter like domains 270 519 IPR036259 -
Lele04g1017 527 SUPERFAMILY MFS general substrate transporter 5 519 IPR036259 -
Lele04g1017 527 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1017 Lele-ChrLele04 6300975 6302786 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1017 1 523 Nodulin-like Gene Family AT2G30300 48.502 4.64e-154 447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g1017 04 6300975 6302786 Lele04g1017 04 6300975 6302786 ECH
Lele01g1014 01 5867933 5870534 Lele04g1017 04 6300975 6302786 hybridization
Lele02g1029 02 6329334 6331145 Lele04g1017 04 6300975 6302786 hybridization