Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1007 ATGGCATCTTCTTCGGGAAGCCTTGACACTTCTAGTAACTCCCACCCCACCTTCACTTTCTCTACGCATCCATTCATGAATACCTCCTTCTCCGAACTTCTCGCTTCTCCTCCCGCCGCCGCCGATAGCCTCGCCTCCGCCGTCGATAAACCGCGCGGATTGTCGGATCGTATAGCGGAGAGAACTGGGTCGGGTGTGCCCAAGTTCAAGTCGACCCCACCTCCTTCGCTGCCTCTCTCTCCTCCTGCCATTTCTCCTTCTTCTTACTTCGCCATCCCTGCTGGGTTGAGCCCCGCAGAACTTCTCGACTCGCCTGTTCTCCTTAATGCTTCTAACATTTTGCCATCTCCGACAACTGGAGCATTCTCTGCTCAGACCTTCAATTGGAAGAGCAGTTCTGGGCAAAACCAGCAAAATATCAAAGAAGAAGACAAGAACTTCTCAAGTTTCTCGTTTCAACCCCAACCCAGACCTCCTCTTCCGTCCACCTCAACGTTTCAAAATTCAGCTGCCTCTAATCAAACTGCATGGAGTTTTGAAACCAAGAAGCAAGATAACTTTTACTCAGGAAAGAATATGGTGAAAGCTGAGAACGCTTCTACACAGAGCTATTCTACTGAGATGGTAATCAGTAATGTCCAAGCGAGCCATAATTCTGGTTTTCAATCGGATCATAGCAACTACCACCCACAACCTCAGACTTTAAGCAGAAGATCAGATGATGGGTATAACTGGAGAAAATATGGGCAGAAGCAAGTGAAAGGAAGTGAGAATCCTAGAAGCTACTATAAATGCACATACCCTAATTGCCCAACGAAGAAGAAGGTTGAGAGGTCTCTGGATGGGCAAATCACTGAGATAGTTTACAAGGGAACACATAACCACCCCAAGCCTCAGGCAACTAGGAGAAACTCATCAAATGCATCTTCCCTCGCAATTTCTGCTTCAAATTCTGTTGCAGCTGACATCCCAGATCAGTCATTTGCCAGCCATGGTAATGGACAAATGGATTCAGCTGCAACACCTGAGAACTCGTCGATATCAATGGGGGATGATGATTTTGAGCAGACTTCCCAGAGGACTAGATCAGGAGGAGATGAGTTTGATGAAGGCGAATCTGATGCCAAAAGATGGAGTTACTACAAATGCACGCACCCAGGATGTCCAGTGAGGAAGCACGTAGAGAGAGCATCACACGACCTAAGGGCAGTGATCACAACGTACGAGGGAAAGCATAACCATGATGTCCCTGCTGCGAGAGGGAGCGGCGGCCATTCTGTGAACAGACCTCTCTTAAACAATTCCACAAACACCAACGGAGCCATGACTACGGCCATAAGGCCATCGGCCATCACACACAACACTAACAACTCTGTTCAGAATTTTAGGGCCGGAGCGTCAGCACCAGAAGCCCTAGGGATGCTTCAGGGTCCAGGAAGCTTCGGGTTTTCAGGGTTTGGGAATTCAATGGGGTCTTTCATGAATCATAATAATAATAATAATCAGCAGCAAGCACAACCTGAGAATGGGTTTTCTTCCAGAGCAAAGGAGGAGCCGAGGGATGACATGTTTCTTGAATCTCTACTAATGCAATTCAAGCAGCAACACAGACCCACATCAAGCTTGAAGATTCTTTCATTTGTCATGCATTCAATCTTCTCAACTCCAAGGGTTTCATTTTGGGAGATGAACCGCTTAACTTCTCTGTTCCTGTCATTTTTCTCCAGCTTTCACTCATCCATCTTCACTGATTTCTTTCTCTTTCTCCTCAGGCCCTTGGGTCAACCCCATATTATTTCTCAAATTCTTGGCGGTTTGACATTAGGACCTTCAATTCTTGGGCGCAACTCAGAATTTGCCAAGAGAGTTTTCCCACCCAAAGGAAAATGTGTGCTTGATACCTTAGCGTTTTTCGGTTTTCATGATATTCGTCTTCCTAGTTGGGGTAAAGATCCAACCATCATTTCTAGATCAGTTTACCTCAAGATTAGCCCACCAGAGTCAATAGGAGTATGTTTTGAAATTTTCTTGGCAACTGCTCTTCTTATTTATGTCATCATGTTTGTTGTGCGTCCAGCAGCATTATGGGCAATTCGACACACCCCAGAGGGGGAACCTGTTAAGGAAATATATATTTTTGGGGTCATCTGTGACATTTTTGCTCAGTGGATTCATGGCCAAGTGCTTGGCTTACATGCATATCTTGTGTCTTTAGTGCTAGGGTTGGCTATACCAGATGGGCCGCCATTAGGAGCTGCACTAGTACACAAGATTGACTACTTTGTTTCTGTAGTGTCCCAGCCTATTATTTTTATCGTATGCGGATTAAGAACAGATGTTTTTGCCATCAAGGAGCTGAGGAATGTGGGTGTAATTCATTTAATATTTTTTGTTGCCTTCTGTGGGAAGATGTTAGCAGTACTATTGCCTCTCCTTTTGTGTAGGATGCCCTTCCGAGATGCTCTTTCTCTTGGTTTTGTTATGAACTGCAAAGGCATTGTCGAACTGGCCTTGTTGATTGACTGGAAATTAGAAAATACCATTAGTGAGGAACTTTATGCAATTATGTTTGTTTCCGTTATGCTCGTAACTGGGATTGTATCGCCTGTTGTGAAAAACCTATATGATCCATCCAGGAGGTTTCTTGCTTATAAAAGGAGGACAATTTTGCATCATAGTGACAATGAACCACTGCAAATTCTCTCATGCATTCACAAACCAGATAATGTCTTGCCAATTCTGAACCTCCTTGCTGCTTCCAATCCAAACATAAAAAGCCCCGTTGATATAGTGGTGCTCCAACTTGTTATGCTCGCGGGCCGTGCATCCTCTCTACTCATCGTGCACGTGCCACGCGAAAATACTTATCAACATCCAACTGAATCTGTGAAAATTTTCCACTCATTCATGAAATTTGAGCATGAGCATGGAGGCCTGGTTACTCTGTGCAGCTATAAAGGCATCTCCCCATATGAAACAATGCACAATGATGTGTGCTTCATGCAACTTGAAAACAGAGCAACCTTTGTAATCATACCTTTTCAGAAGAAGTTGATATATGGAAGGAAACAAGTGGCATCATCTCCCTTCAAGCCCTTGACTAAGAATGTTCTAGAAAAAGCCCCTTGCTCAGTTGGCGTCCTTGTGGATCGTGGCAATCAACAAAACTTTTGGTGTGATCATTTTGTCAGGGAACCAACACATCAAGTAGCTGTGTTCTTTGGAGGAGCAGATGACCGTGAAGCCCTTGCATTGGCAAGGCGCATGTTGGAACAACCCAATGTGTATATAACTCTGGTTCATTTTTCTTCTTCTTCAACAGAGATTGTTGCTGGTACAGAAAGGAGCAAAGTGCTTGATACCCAGATCTTGAGTGACTTCAGGCTCAGCGCCTTCCGAAATGAAAGGGTTTCGTACAAGGAGGCACGAGTAATGGAAGGGAGGGACGTGCTTTCAACTGTTGAAGACATAGACAATGTTTATGACATTACCATGGTGGGAAGAAGGCATGGAGCTTCAACTCTGATGTCTGAACTTAAGAAGTGGAAGGATGGAGAATTGGGAACTGTGGGAGAGATTCTTGCCTCCTTAGACATTGGAGTTAAAACTTCAGTTCTTGTGGTGCAACAGCAAACCAGATTATGGGGATTACGTGACCCTCAGGAATCAACACGCCTGAGAAGAGAAAGAATAGAAGCGTACGGGGTTTGA 3711 0.4481 MASSSGSLDTSSNSHPTFTFSTHPFMNTSFSELLASPPAAADSLASAVDKPRGLSDRIAERTGSGVPKFKSTPPPSLPLSPPAISPSSYFAIPAGLSPAELLDSPVLLNASNILPSPTTGAFSAQTFNWKSSSGQNQQNIKEEDKNFSSFSFQPQPRPPLPSTSTFQNSAASNQTAWSFETKKQDNFYSGKNMVKAENASTQSYSTEMVISNVQASHNSGFQSDHSNYHPQPQTLSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSLDGQITEIVYKGTHNHPKPQATRRNSSNASSLAISASNSVAADIPDQSFASHGNGQMDSAATPENSSISMGDDDFEQTSQRTRSGGDEFDEGESDAKRWSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGGHSVNRPLLNNSTNTNGAMTTAIRPSAITHNTNNSVQNFRAGASAPEALGMLQGPGSFGFSGFGNSMGSFMNHNNNNNQQQAQPENGFSSRAKEEPRDDMFLESLLMQFKQQHRPTSSLKILSFVMHSIFSTPRVSFWEMNRLTSLFLSFFSSFHSSIFTDFFLFLLRPLGQPHIISQILGGLTLGPSILGRNSEFAKRVFPPKGKCVLDTLAFFGFHDIRLPSWGKDPTIISRSVYLKISPPESIGVCFEIFLATALLIYVIMFVVRPAALWAIRHTPEGEPVKEIYIFGVICDIFAQWIHGQVLGLHAYLVSLVLGLAIPDGPPLGAALVHKIDYFVSVVSQPIIFIVCGLRTDVFAIKELRNVGVIHLIFFVAFCGKMLAVLLPLLLCRMPFRDALSLGFVMNCKGIVELALLIDWKLENTISEELYAIMFVSVMLVTGIVSPVVKNLYDPSRRFLAYKRRTILHHSDNEPLQILSCIHKPDNVLPILNLLAASNPNIKSPVDIVVLQLVMLAGRASSLLIVHVPRENTYQHPTESVKIFHSFMKFEHEHGGLVTLCSYKGISPYETMHNDVCFMQLENRATFVIIPFQKKLIYGRKQVASSPFKPLTKNVLEKAPCSVGVLVDRGNQQNFWCDHFVREPTHQVAVFFGGADDREALALARRMLEQPNVYITLVHFSSSSTEIVAGTERSKVLDTQILSDFRLSAFRNERVSYKEARVMEGRDVLSTVEDIDNVYDITMVGRRHGASTLMSELKKWKDGELGTVGEILASLDIGVKTSVLVVQQQTRLWGLRDPQESTRLRRERIEAYGV 1236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1007 1236 MobiDBLite consensus disorder prediction 355 372 - -
Lele04g1007 1236 MobiDBLite consensus disorder prediction 298 354 - -
Lele04g1007 1236 SUPERFAMILY WRKY DNA-binding domain 378 417 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele04g1007 1236 MobiDBLite consensus disorder prediction 217 243 - -
Lele04g1007 1236 Pfam Sodium/hydrogen exchanger family 675 871 IPR006153 GO:0006812|GO:0015299|GO:0016020|GO:0055085
Lele04g1007 1236 SMART WRKY_cls 239 297 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele04g1007 1236 SMART WRKY_cls 350 416 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele04g1007 1236 FunFam WRKY transcription factor 229 299 - -
Lele04g1007 1236 PANTHER CATION/H + ANTIPORTER 671 1213 - -
Lele04g1007 1236 MobiDBLite consensus disorder prediction 413 438 - -
Lele04g1007 1236 MobiDBLite consensus disorder prediction 290 372 - -
Lele04g1007 1236 Gene3D WRKY domain 356 418 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele04g1007 1236 Gene3D WRKY domain 226 299 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele04g1007 1236 MobiDBLite consensus disorder prediction 217 239 - -
Lele04g1007 1236 MobiDBLite consensus disorder prediction 147 171 - -
Lele04g1007 1236 Pfam WRKY DNA -binding domain 377 414 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele04g1007 1236 Pfam WRKY DNA -binding domain 240 296 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele04g1007 1236 MobiDBLite consensus disorder prediction 492 511 - -
Lele04g1007 1236 MobiDBLite consensus disorder prediction 492 516 - -
Lele04g1007 1236 MobiDBLite consensus disorder prediction 41 83 - -
Lele04g1007 1236 SUPERFAMILY WRKY DNA-binding domain 238 298 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele04g1007 1236 ProSiteProfiles WRKY domain profile. 240 417 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele04g1007 1236 Gene3D - 654 881 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1007 Lele-ChrLele04 6246963 6253865 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1007 589 640 Antiporter Super Family AT2G13620 50.000 3.07e-10 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele04g1007 Na_H_Exchanger 2.5e-22 CL0064