Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0999 ATGGCCACGGACGTAACGGCCGAATTCCAAAACGCCGATTTTCGGCCCGTTCAGCAGCCGCCAGATTTCCATCCGGAGCTCGCCGAGTCACCTCACGATGGGCTCCATTTTTGGCAGTTCATGGTCGCCGGTTCCATTGCGGGCTCCGTTGAGCACATGGCAATGTTCCCCGTCGACACCGTGAAGACGCATATGCAAGCTCTTGGGTCATGCCCAATCAAGTCCGTCAGCGTTCGCCAGGCTCTCCAATCGATTTTGAAATCTGAGGGTCCGTCTGCACTATACCGAGGGATCGGCGCCATGGGTCTTGGTGCTGGACCAGCACACGCTGTGTATTTTTCCTTTTATGAGGTTTGTAAGAAGTATTTTTCCCATGGGGATCCCAAAAACTCCACTGCCCATGCGATTTCTGGTGTTTGTGCTACTGTTGCGAGCGACGCTGTGTTTACGCCCATGGATATGGTGAAGCAGAGATTGCAATTGAGTAACAGTGGTTACAAGGGTGTTTGGGACTGTGTGAAGAGGGTTTTGAGCGAGGAGGGGGTAGGGGCATTTTATGCATCTTATAGGACTACAGTTGTGATGAACGCCCCATATACAGCAGTGCATTTTGCAACTTATGAGGCTGCAAAAAGAGGCCTTAAGGAGATTTCGCCTCAGAGTGCTGACGATGAACGTTTGGTTGTTCATGCAACTGCTGGAGCTGCTGCTGGTGCATTGGCTGCTGCTGTTACCACACCGCTTGATGTGGTCAAAACTCAATTGCAGTGCCAGGGTGTTTGCGGATGTGATAGATTCAAGAGCGGTTCAATTGGGGATGTTATTAAAACTATAGTGAAAAAGGATGGGTACAGAGGGCTCATGCGAGGATGGATTCCTAGGATGTTATTCCATGCCCCTGCGGCTGCAATCTGCTGGTCCACATATGAAGCTGGAAAGGGCTTTTTCCAAGAGTTCAATAAAAAACAAGATAAGTGA 978 0.501 MATDVTAEFQNADFRPVQQPPDFHPELAESPHDGLHFWQFMVAGSIAGSVEHMAMFPVDTVKTHMQALGSCPIKSVSVRQALQSILKSEGPSALYRGIGAMGLGAGPAHAVYFSFYEVCKKYFSHGDPKNSTAHAISGVCATVASDAVFTPMDMVKQRLQLSNSGYKGVWDCVKRVLSEEGVGAFYASYRTTVVMNAPYTAVHFATYEAAKRGLKEISPQSADDERLVVHATAGAAAGALAAAVTTPLDVVKTQLQCQGVCGCDRFKSGSIGDVIKTIVKKDGYRGLMRGWIPRMLFHAPAAAICWSTYEAGKGFFQEFNKKQDK 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0999 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 35 122 IPR018108 -
Lele04g0999 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 225 315 IPR018108 -
Lele04g0999 325 PRINTS Mitochondrial carrier protein signature 144 162 IPR002067 GO:0055085
Lele04g0999 325 PRINTS Mitochondrial carrier protein signature 97 117 IPR002067 GO:0055085
Lele04g0999 325 PRINTS Mitochondrial carrier protein signature 186 204 IPR002067 GO:0055085
Lele04g0999 325 PRINTS Mitochondrial carrier protein signature 53 67 IPR002067 GO:0055085
Lele04g0999 325 PRINTS Mitochondrial carrier protein signature 40 53 IPR002067 GO:0055085
Lele04g0999 325 PRINTS Mitochondrial carrier protein signature 234 256 IPR002067 GO:0055085
Lele04g0999 325 SUPERFAMILY Mitochondrial carrier 33 310 IPR023395 -
Lele04g0999 325 Pfam Mitochondrial carrier protein 35 125 IPR018108 -
Lele04g0999 325 Pfam Mitochondrial carrier protein 226 318 IPR018108 -
Lele04g0999 325 Pfam Mitochondrial carrier protein 130 215 IPR018108 -
Lele04g0999 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 129 213 IPR018108 -
Lele04g0999 325 FunFam Mitochondrial carrier protein, expressed 130 324 - -
Lele04g0999 325 PANTHER MITOFERRIN-1-RELATED 29 320 - -
Lele04g0999 325 Gene3D Mitochondrial carrier domain 129 325 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0999 Lele-ChrLele04 6175612 6177806 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0999 1 320 Chloroplast and Mitochondria Gene Families AT1G07030 76.471 5.47e-177 491