Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0985 ATGCAAGTTCATACTGCGTGCGCGCGTAATTTTTCAGATGTCGTATCCATTCCAAAAACGAACGAGAACTTCAGACTCCCCTACGACGTCAAGGGTCGTTTTCGCTTGCGATCAATAACAGAGGACGAGGCAAAGTTCAAGCTCTCTAAGGTGAGACCGGTGCAGTTTGGGAGAAGGGGCATTCCCTATCTGAACACATACCATGGACGAACCATCAGATATCCTGACCCACTTATAAAAGCCAACGACACCATAAAACTTGACCTAGACCCCTACAAGATCACCGACTTCATAAAGTTTGAAGTTGGGAATATTGCCATGGTGACGGGTGGAAGGAACAGAGGACGAGTTGGGGTCATAAAGAGGAGGGAAAAACATATGGGCACCTTCGACCCCATAATTGTCCAAGATACTTTTGGAAACGAATTCTCTACTCGTCTGGAAAACGTTTTCATTATTGTTCAGGGCTCAAACCCATGGGTCTCTTTACCAAGGGAAAGGGAATTAAGCTGA 513 0.4581 MQVHTACARNFSDVVSIPKTNENFRLPYDVKGRFRLRSITEDEAKFKLSKVRPVQFGRRGIPYLNTYHGRTIRYPDPLIKANDTIKLDLDPYKITDFIKFEVGNIAMVTGGRNRGRVGVIKRREKHMGTFDPIIVQDTFGNEFSTRLENVFIIVQGSNPWVSLPRERELS 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0985 170 Pfam Ribosomal family S4e 20 94 IPR013845 -
Lele04g0985 170 Gene3D - 100 169 IPR014722 -
Lele04g0985 170 SMART kow_9 99 126 IPR005824 -
Lele04g0985 170 FunFam 40S ribosomal protein S4 47 97 - -
Lele04g0985 170 Gene3D - 47 97 IPR038237 -
Lele04g0985 170 Pfam KOW motif 102 127 IPR005824 -
Lele04g0985 170 PANTHER 30S/40S RIBOSOMAL PROTEIN S4 7 167 IPR000876 GO:0003735|GO:0005840|GO:0006412
Lele04g0985 170 CDD KOW_RPS4 100 153 IPR041982 -
Lele04g0985 170 FunFam 40S ribosomal protein S4 100 170 - -
Lele04g0985 170 Pfam 40S ribosomal protein S4 C-terminus 137 167 IPR032277 -
Lele04g0985 170 Gene3D - 3 42 IPR036986 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0985 Lele-ChrLele04 6118193 6118783 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0985 11 165 Cytoplasmic Ribosomal Protein Gene Family AT5G07090 73.548 6.18e-82 240