Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0961 ATGGCGTCAACGGCTAGTTTTTTGGGGTTCTTCCTCGCGTTGGCCTCCTTCTTGTGTTGTGTTGGGTCCTTGTCGGAGATCGAAGCTCTAACGTCTTTCAAGCTTAGTCTCCATGACCCTCTCGGCTCCTTGGAAGGTTGGGATCGCTCCACGCCTTCCGCTCCTTGTGACTGGCATGGCATTTTCTGTTACGGCAACCGAGTTCGTGAGCTTCGTTTGCCTCGCCTTCAACTCGCCGGTCCGCTCTCGGATTCCCTCTCCGGCTTGCTTCAACTTCGCAAGTTAAGCCTTCATTCTAACAACTTCAATGGCTCCATTCCTCCTTCTCTCTCTCAATGCCTGCTCCTGCGTTCCGTTTATCTGCATAATAACTCTTTTTCTGGTAAACTCCCGCCGGCTCTTCTCAACCTCACCAACCTTCAAATCCTCAATGTTGCTCACAACTTTCTTTCTGGCCGAATCACCGGAGATTTTTCGAACTCTCTCCGGTTCCTTGATTTATCGTCGAATGCATTTTCCGGCGATATTCCTGCTAAGTTTTCGTCAAAATCTCAGCTACGACTCATCCACTTGTCTTACAATCGCTTCTCTGGTAGAATACCGGGCACAATTGGAGTTCTGGGGCAGCTTGAGTATCTCTGGCTGGACTCCAACCAGTTATATGGGACTCTGCCTTCGGCTTTAGTTAACTGCTCTTCTCTTGTGCATCTAAGCGCCGTAAACAATGCGCTTTCCGGTTTCATTCCGGCGACCATGGGGACGATGCCAAGACTTCAAGTGCTGTCGTTGTCGTCGAATCAACTATCGGGATCGGTCCCCACTTCTCTGTTTTACAATGTCCACTTGGCCAATTCTTCTTCGCTGAGAATCGTTCAATTAGGCTTTAATACACTCACGGGCATTTCCGAGCCGCCAAATGCAAGGTGTGTTAATGTTTTGGAGATTTTAGAGCTTAAGGAGAATCGTATTCGCGCTGCATTTCCCTCCTGGTTGACTAATGCGACGTCGTTAAGAGCTGTTGATTTTTCCGGAAACTATTTTTCTGGTATTTTGCCGGCGGATATTGGGAATTTATTGAGGCTAGAGGAGCTGAGGGTGGCAAACAATTCATTATCTGGTGATGTTCCTCGTGAAATTGTGAAATGTACTTTGTTACAGGTTCTTGATCTCCAAGGAAACCGATTCTCCGGCCTCATTCCTTCATTTCTTGGCCAGCTGAGGAACCTCAAGATGTTATCTCTTGGCGATAACCTGTTTACTGGTCCTATACCCACGAGTTTGGGAAAACTTTCTGAGCTCGAGTCGTTGAATTTGAGCAATAATAAACTTACGGGGGCTATACCCCCAGAATTAATGCGATTGGGTAACATGAGTGCTTTGAATCTCAGTAATAACAAATTTTCAGGCCAACTTTCGTCTGCTATCGGGAACTTAACGGCTTTGCAGGTTCTGAATTTGAGTCATTGTGGGTTTTCAGGAAAGATTCCTGCTAGTGTTGGCGGATTAATGAAACTAACGGAGCTGGATTTAAGTGGACAAAGTCTTTCAGGTGACTTGCCAATCGAGCTTTTCGGATTACCTAGCCTGGAGGTAGTTGCTCTTCAAGAGAACCACTTATCTGGAGCTGTTCCAGAGGGTTTCAGCAGTGTAGTTACTCTACAATATCTTAATATCAGCTCCAATGTCTTTGCTGGTGAAATTCCAGCTACTTATGGATTTCTTCGGTCGTTAATTGTTCTTTCTGCGTCTCAGAATCATATTTCTGGTAGAATACCTTCGGAGATTGTTAACTGTTCTCAGCTTGAAGTGCTCGAGCTTCGTTCAAATCATTTGCATGCTAACATTCCTGGCTACGTCGACCGTCTTAATCGTTTAAGGGTCCTAGATTTGGGAAACAACAAGTTAACGGGAGATATTCCAGAAGAAGTATCCGAATGTTCTGCTTTGACTTCACTCCTCTTGGATGCTAATCAACTAACGGGTCAAATACCAGAATCCTTGTCAAGTTTATCAAACCTGACTGCGTTAGATCTCTCCTCAAACCAATTAAGCGGAGACATTCCGGCCAGCCTGTCCCTCATCTCTGGTTTTAAGTATTTAAATGTCTCCAGAAATAATCTTGAGGGTGAAATTCCAGAAATGCTGGGCTCCCGATTTAATGATCCTTCTATATTTGCAAGGAATAACAGGTTATGCGGAAAGCCACTGCATCGAGAATGTGCAAATGTAAGAAGGCGAAGGAGGAGGAGGCTAATAATATTTATAGGTGTGGCTCTCGGTGGACTATGCCTTTTGGTACTCTGCTGCTGTGGCTATATTTACAGCCTCTTACGGTGGCGCAAGAAGCTGAGAGAAGGAGTAACTTGGGAGAAGAAGAAGAGCCCTGCTCGTTCAAGTTCAGGAGCAGACAGAGATCGAGGAAGTGGGGAAAATGGAGGGCCAAAACTAGTAATGTTCAACAACAAGATCACTTATGCTGAGACAATGGAAGCAACTAGGCAATTTGATGAAGAGAATGTGTTGAGCAGAGGAAGATACGGTCTTGTGTTCAAAGCCTCGTACCCAGATGGAATTGTTCTGTCAATCCGTCGTCTTCCTGGTGGATCCATCGAGGAAAGAACCTTCCGTAAAGAGGCAGAATCATTAGGAAAAGTGAAGCACCGTAATTTAACTGTATTGCGTGGCTATTATGCAGGACCACCTGACGTGAGGCTTCTTGTTTATGACTACATGCCCAATGGAAATCTTGGGACTCTTCTTCAAGAAGCATCTCAGAAAGACGGCCATGTACTGAATTGGCCAATGCGTCATCTCATCGCACTGGGCATTGCTCGTGGGCTAGCTTTCCTACATTCAGTCTCAGTAGTTCATGGCGATGTGAAGCCTCAAAATGTTCTGTTTGATGCTGATTTTGAAGCCCATTTATCAGAATTTGGCTTAGACAGAATAACAAACGCAACCCCAGCAGAAGCATCGTCATCTTCCACTCCCATAGGATCAGTGGGTTACGTATCTCCGGAAGCAGCGTTAACTGGGCAAGCGACCAAGGAAGCTGACGTGTACAGCTTTGGGATTGTATTGTTGGAGATACTGACCGGAAGAAAACCGGTGATGTTCACGCTAGACGAAGACATAGTGAAATGGGTGAAAAGCCAATTGCAGAGAGGTCAGATATCGGAATTGCTTGAGCCTGGGTTGTTAGAGTTAGACCCAGAGTCATCGGAATGGGAAGAGTTCTTGTTGGGAACCAAAGTGGCTCTTCTATGCACATCACCGGATCCTCTTGATCGGCCGTCAATGAGTGACATTGTTTTCATGCTTGAATGTTGCCGGGTCGGACCGGAGATTCCATCGTTGGCCGATCCCACCACGTTACCTTCCCCTACTTAA 3390 0.4593 MASTASFLGFFLALASFLCCVGSLSEIEALTSFKLSLHDPLGSLEGWDRSTPSAPCDWHGIFCYGNRVRELRLPRLQLAGPLSDSLSGLLQLRKLSLHSNNFNGSIPPSLSQCLLLRSVYLHNNSFSGKLPPALLNLTNLQILNVAHNFLSGRITGDFSNSLRFLDLSSNAFSGDIPAKFSSKSQLRLIHLSYNRFSGRIPGTIGVLGQLEYLWLDSNQLYGTLPSALVNCSSLVHLSAVNNALSGFIPATMGTMPRLQVLSLSSNQLSGSVPTSLFYNVHLANSSSLRIVQLGFNTLTGISEPPNARCVNVLEILELKENRIRAAFPSWLTNATSLRAVDFSGNYFSGILPADIGNLLRLEELRVANNSLSGDVPREIVKCTLLQVLDLQGNRFSGLIPSFLGQLRNLKMLSLGDNLFTGPIPTSLGKLSELESLNLSNNKLTGAIPPELMRLGNMSALNLSNNKFSGQLSSAIGNLTALQVLNLSHCGFSGKIPASVGGLMKLTELDLSGQSLSGDLPIELFGLPSLEVVALQENHLSGAVPEGFSSVVTLQYLNISSNVFAGEIPATYGFLRSLIVLSASQNHISGRIPSEIVNCSQLEVLELRSNHLHANIPGYVDRLNRLRVLDLGNNKLTGDIPEEVSECSALTSLLLDANQLTGQIPESLSSLSNLTALDLSSNQLSGDIPASLSLISGFKYLNVSRNNLEGEIPEMLGSRFNDPSIFARNNRLCGKPLHRECANVRRRRRRRLIIFIGVALGGLCLLVLCCCGYIYSLLRWRKKLREGVTWEKKKSPARSSSGADRDRGSGENGGPKLVMFNNKITYAETMEATRQFDEENVLSRGRYGLVFKASYPDGIVLSIRRLPGGSIEERTFRKEAESLGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLGTLLQEASQKDGHVLNWPMRHLIALGIARGLAFLHSVSVVHGDVKPQNVLFDADFEAHLSEFGLDRITNATPAEASSSSTPIGSVGYVSPEAALTGQATKEADVYSFGIVLLEILTGRKPVMFTLDEDIVKWVKSQLQRGQISELLEPGLLELDPESSEWEEFLLGTKVALLCTSPDPLDRPSMSDIVFMLECCRVGPEIPSLADPTTLPSPT 1129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0961 1129 SUPERFAMILY L domain-like 305 690 - -
Lele04g0961 1129 ProSiteProfiles Protein kinase domain profile. 835 1116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g0961 1129 Gene3D Phosphorylase Kinase; domain 1 810 910 - -
Lele04g0961 1129 SUPERFAMILY Protein kinase-like (PK-like) 814 1119 IPR011009 -
Lele04g0961 1129 ProSiteProfiles Leucine-rich repeat profile. 624 646 IPR001611 GO:0005515
Lele04g0961 1129 FunFam Leucine-rich repeat receptor protein kinase EMS1 201 303 - -
Lele04g0961 1129 Gene3D Ribonuclease Inhibitor 456 743 IPR032675 -
Lele04g0961 1129 Gene3D Transferase(Phosphotransferase) domain 1 911 1114 - -
Lele04g0961 1129 SMART serkin_6 835 1106 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g0961 1129 MobiDBLite consensus disorder prediction 790 810 - -
Lele04g0961 1129 Pfam Leucine rich repeat N-terminal domain 25 63 IPR013210 -
Lele04g0961 1129 Gene3D Ribonuclease Inhibitor 158 455 IPR032675 -
Lele04g0961 1129 MobiDBLite consensus disorder prediction 790 815 - -
Lele04g0961 1129 SUPERFAMILY L domain-like 21 302 - -
Lele04g0961 1129 FunFam Putative LRR receptor-like serine/threonine-protein kinase 798 910 - -
Lele04g0961 1129 ProSiteProfiles Leucine-rich repeat profile. 672 694 IPR001611 GO:0005515
Lele04g0961 1129 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 911 1115 - -
Lele04g0961 1129 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 452 744 - -
Lele04g0961 1129 Pfam Leucine rich repeat 504 561 IPR001611 GO:0005515
Lele04g0961 1129 Pfam Leucine rich repeat 600 659 IPR001611 GO:0005515
Lele04g0961 1129 Pfam Leucine rich repeat 385 443 IPR001611 GO:0005515
Lele04g0961 1129 SMART LRR_typ_2 137 160 IPR003591 -
Lele04g0961 1129 SMART LRR_typ_2 207 231 IPR003591 -
Lele04g0961 1129 SMART LRR_typ_2 670 694 IPR003591 -
Lele04g0961 1129 SMART LRR_typ_2 358 382 IPR003591 -
Lele04g0961 1129 SMART LRR_typ_2 574 598 IPR003591 -
Lele04g0961 1129 SMART LRR_typ_2 430 454 IPR003591 -
Lele04g0961 1129 SMART LRR_typ_2 89 113 IPR003591 -
Lele04g0961 1129 SMART LRR_typ_2 622 646 IPR003591 -
Lele04g0961 1129 SMART LRR_typ_2 526 549 IPR003591 -
Lele04g0961 1129 SMART LRR_typ_2 478 502 IPR003591 -
Lele04g0961 1129 SMART LRR_typ_2 255 279 IPR003591 -
Lele04g0961 1129 Gene3D Ribonuclease Inhibitor 24 157 IPR032675 -
Lele04g0961 1129 ProSitePatterns Serine/Threonine protein kinases active-site signature. 955 967 IPR008271 GO:0004672|GO:0006468
Lele04g0961 1129 Pfam Leucine Rich repeat 671 686 IPR001611 GO:0005515
Lele04g0961 1129 Pfam Protein tyrosine and serine/threonine kinase 838 1054 IPR001245 GO:0004672|GO:0006468
Lele04g0961 1129 Pfam Leucine Rich Repeat 481 502 IPR001611 GO:0005515
Lele04g0961 1129 PANTHER UNNAMED PRODUCT 287 1040 - -
Lele04g0961 1129 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 23 182 - -
Lele04g0961 1129 FunFam Piriformospora indica-insensitive protein 2 351 445 - -
Lele04g0961 1129 PRINTS Leucine-rich repeat signature 670 683 - -
Lele04g0961 1129 PRINTS Leucine-rich repeat signature 433 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0961 Lele-ChrLele04 5939083 5942472 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0961 1 1128 Receptor kinase-like Gene Family AT1G75640 64.405 0.0 1361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Lele04g0961 PK_Tyr_Ser-Thr 5e-31 CL0016