LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele04g0955	ATGGAGGATGTTGTCCGACGATGGATCTGCTACGGTCGGAGCCAATGCAATTGGTTCAGCTCATCATTCCGACCGAATCGGCTTACCGAGCCATCTCTTACCTTGGCGATCTTGGACTCTTTCAATTCAAAGATGTATTCCTCATTTCCTTCTTCCTTTCTTCACTCTGCCTCCTTTTCTAATTCCTTCTTTTTTCTTATTCAGTTTTCCATCACTGTTATAATGTTTTTCGTGAATCTTGATTCTCTTAATGCAGAGAAAAGCCCGTTCCAACGGACATATGCTGCGCAGATTAAAAGATGTGGGGAAATGACGCTCAAGCTTCGGTTCTTTAAGGAACAAATGGCAAAGGCCGGTTTATCACCCTCGACAAGGTCAATGAGCGATGGAGAAGTTGATCTGGACTATTTAGAGGTTAAACTTGCAGAGCTCGAAGCTGAGCTAATTGAGAATAATGTGAATAATGATAAGTTGCAACATAGTTACAGTGAGCTATTAGAGTATAAACTCGTTCTGCAGAAGGTTGGTGAGTTTTTCTCACCGGCCCAAAAAAGCGCAGCATCTCAACAGAGAGAACTTGGAGTTCAGAGCAATTCCGAAGGGTCTATTGACAGCCCATTACTACAGGAACAAGTACAGCTTTTTCCAAGAGAAAAATCAATGTCTTTCGAAAGAATTTTATTTCGTGCTACTAGGGGTAACTTGTTTCTGAAGCAAGCCGTGATTGGACATCCTGTACTTGATCCTTTGTCAGGAGAGAAGGTTGATAAAAATGCGTTTCTTATCTTTTATTCTGGAGAAAGTGCTAATAGTAAAATTCTAAAAATATGCGATGCCTTTGGAGCAAATCGTTATCCTTTCACAGACGACTTGAGTATACAATTTCAGACGATTACAGAGGAATACTATATTGCAGACAATTGGATATCACTACGAGACGTGGAGCCTCTGGTGAAGAAGGTAAAATCCATTTATCACACTTTGAATATGTTTAACATCGATGTGACAAAGAAATGTCTTGTCGCAGAAGGTTGGTGCCCTGTTTTTGCAACAAATCAGATTCAAAGTGAATTGCAGCGAGCAAGCATGGACAGTAACTCACAAGTTGGGGCTATATTCCAGGTTTTACAAACAAAGGAATCACCACCTACCTATTTCCGAACAAACAAATTTACTTCTGCTTTTCAAGAAATTGTAGATGCTTATTGGTAA	1212	0.4018	MEDVVRRWICYGRSQCNWFSSSFRPNRLTEPSLTLAILDSFNSKMYSSFPSSFLHSASFSNSFFFLIQFSITVIMFFVNLDSLNAEKSPFQRTYAAQIKRCGEMTLKLRFFKEQMAKAGLSPSTRSMSDGEVDLDYLEVKLAELEAELIENNVNNDKLQHSYSELLEYKLVLQKVGEFFSPAQKSAASQQRELGVQSNSEGSIDSPLLQEQVQLFPREKSMSFERILFRATRGNLFLKQAVIGHPVLDPLSGEKVDKNAFLIFYSGESANSKILKICDAFGANRYPFTDDLSIQFQTITEEYYIADNWISLRDVEPLVKKVKSIYHTLNMFNIDVTKKCLVAEGWCPVFATNQIQSELQRASMDSNSQVGAIFQVLQTKESPPTYFRTNKFTSAFQEIVDAYW	403

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele04g0955	403	Pfam	V-type ATPase 116kDa subunit family	311	402	IPR002490	GO:0033179\|GO:0046961\|GO:1902600
	Lele04g0955	403	Pfam	V-type ATPase 116kDa subunit family	78	298	IPR002490	GO:0033179\|GO:0046961\|GO:1902600
	Lele04g0955	403	Coils	Coil	127	161	-	-
	Lele04g0955	403	PANTHER	VACUOLAR PROTON ATPASES	78	402	IPR002490	GO:0033179\|GO:0046961\|GO:1902600

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele04g0955	Lele-ChrLele04	5904114	5907022	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele04g0955	77	402	Primary Pumps ATPases(2)	AT4G39080	60.724	2.48e-143	426