Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0954 ATGCACACTTTCATCCCTTTGAGTCAAGAGTTTCTTGGAGTGAACATCGTTGCCATGGCTGAGTCAGGGTCTAAGAGAATGTGGTGTTCTATTCCAGAGCGGCTTCAGCTGCACGTGGCCATGTTGGCCCTGCAGTTTGGCTACGCAGGTTTCCATGTCGTTTCAAGAGCTGCCCTCAACATGGGCATCAGCAAACTTGTTTTCCCAGTCTACCGTAACATCATCGCTTTGCTTCTCCTCCTTCCCTTCGCTTACTTCCTCGAAAAGAAGGATAGGCCTGCACTTAACTGGAACTTCACCCTCAACTTCTTCCTTCTCGCACTTATTGGGATCACAGCAAACCAAGGGTTCTACTTGCTTGGCTTGGACAACACATCTCCGACCTTCGCTTCAGCAATTCAGAACTCCGTCCCGGCCATCACTTTCCTCATGGCAGCCATATTCGGGATTGAGAAAGTGAGGTGGAACCGAAGAGATGGGGTGGCCAAGGTGGCCGGAACATTGTTCTGTGTGGCCGGAGCAACCGTGATAACACTATATAAGGGTCCAACCATATACAGCCCAGTCCCAAATCTTCAGAATACTTCAAGTTCGCCAATATCTCTAATTGGGTCACTGGGGCTTGGAGATGCAAACGGAAAGAGCTGGACTCTTGGATGTATCTACCTCATAGGCCATTGCTTGTCCTGGTCAGGCTGGTTGGTGATGCAAGCACCAGTTCTCAAGAAGTACCCAGCTCGTCTCTCTGTCACTTCTTACACTTGTTTCTTTGGCCTCATTCAGTTTCTGGTCATCGCTTTGATCTTTGAAAGAGATTCTCAGGCTTGGCTTTTCCACTCTGGTGGCGAAGCTTTCACTATTCTTTATGCTGGAGTGGTGGCTTCAGGAATTGCCTTCGCCGTTCAGATATGGTGCATTGACAGAGGGGGCCCTGTGTTCGTCGCCGTGTACCAACCAGTTCAGACTCTTGTCGTCGCCATCATGTCCTCCATAGCCTTAGGCGAAGAGTTCTATTTGGGCGGGATTATTGGAGCAGCATTGATTGTGATGGGATTGTACTTAGTGCTGTGGGGCAAAAGTGAAGAGAAGAAGCTTGCAAAGGAACAAATTGCGATTGTGTCTGCTGCTGAGCACGTTCCGAGGCCAAAAAGCCACTCCAAGGCCACTCTTACTCAGCCACTTCTTCCTTCGTCCACAGAAAATGTCTGA 1209 0.4938 MHTFIPLSQEFLGVNIVAMAESGSKRMWCSIPERLQLHVAMLALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIALLLLLPFAYFLEKKDRPALNWNFTLNFFLLALIGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAAIFGIEKVRWNRRDGVAKVAGTLFCVAGATVITLYKGPTIYSPVPNLQNTSSSPISLIGSLGLGDANGKSWTLGCIYLIGHCLSWSGWLVMQAPVLKKYPARLSVTSYTCFFGLIQFLVIALIFERDSQAWLFHSGGEAFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMSSIALGEEFYLGGIIGAALIVMGLYLVLWGKSEEKKLAKEQIAIVSAAEHVPRPKSHSKATLTQPLLPSSTENV 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0954 402 SUPERFAMILY Multidrug resistance efflux transporter EmrE 71 181 - -
Lele04g0954 402 Pfam EamA-like transporter family 41 178 IPR000620 GO:0016020
Lele04g0954 402 Pfam EamA-like transporter family 218 356 IPR000620 GO:0016020
Lele04g0954 402 PANTHER WAT1-RELATED PROTEIN 39 368 IPR030184 GO:0016020|GO:0022857
Lele04g0954 402 SUPERFAMILY Multidrug resistance efflux transporter EmrE 257 360 - -
Lele04g0954 402 MobiDBLite consensus disorder prediction 383 402 - -
Lele04g0954 402 MobiDBLite consensus disorder prediction 385 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0954 Lele-ChrLele04 5879296 5882557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0954 19 402 Nodulin-like Gene Family AT1G75500 73.924 0.0 576