Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0921 ATGGCGTCGAGCTCGACTTGGACAGCGAAGCAGAACAAGAGATTTGAGAATGCTCTGGCGTTGTACGACGAGGATACGCCGGAGAGGTGGCAGAAGCTGGCGAGGGCGGTGGGAGGGAAGACGGTGGAGGAGGTGAAGAGGCATTATGAGAAGCTTGTTGAAGACGTGAGGCTCATCGAGGAAGGCCACATCCCTTTGCCTAATTACAATACAAACAACGTTCAAGTTCAACCAGTACGTGGAGGACCCAGAACTTACGCTACTTACTTGGATGATCAACAGCTAAGGATGAAGACTCTGAGCCTCCAGTGA 312 0.5192 MASSSTWTAKQNKRFENALALYDEDTPERWQKLARAVGGKTVEEVKRHYEKLVEDVRLIEEGHIPLPNYNTNNVQVQPVRGGPRTYATYLDDQQLRMKTLSLQ 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0921 103 ProSiteProfiles SANT domain profile. 2 57 IPR017884 -
Lele04g0921 103 ProSiteProfiles Myb-like domain profile. 1 53 IPR001005 -
Lele04g0921 103 SMART sant 3 55 IPR001005 -
Lele04g0921 103 SUPERFAMILY Homeodomain-like 5 60 IPR009057 -
Lele04g0921 103 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 3 73 IPR044636 GO:0003700
Lele04g0921 103 CDD SANT 6 53 IPR001005 -
Lele04g0921 103 Pfam Myb-like DNA-binding domain 5 52 IPR001005 -
Lele04g0921 103 Gene3D - 1 66 - -
Lele04g0921 103 FunFam Transcription factor SRM1 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0921 Lele-ChrLele04 5685476 5686052 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele04g0921 Myb_DNA-binding 5e-06 CL0123