Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0901 ATGAAACAGTTTCTGAATCTCATACCTCTGTTCATACTTTACTTCGTGTGTTCAAATGTTAGAGCAGAGCAGAATTACTCTGGAAATTCTGTGCTCAGCTGCAGCATCGAAGATGAAAACGGGCCTTCCTCTGCTTTCCTTTACACATGTAATGGCCTCAGCAAATCGTGCCCGACATTCCTCATCTTCAAGTCCCAACCTCCTTACAACAACGTTACCTCAATTTCTAATCTGACATCATCGGACCCAGAAAAGCTCGCCGTGATCAACAACGTCTCTGTGTTCACTGTGTTCCCAACTGGCAAAGAGGTAATTGTCCCTGTGAACTGCTACTGCAAAACTAAGGATTATTACCAAGCTGATACCAATTACACCTTGCCCACAATTCAAACTTATTTCACAATAGCAAATGACACCTATGAGGGATTATCCACTTGCAATTCTCTCTTGCGTTATAATCCATATGGGGCTTTAGATTTGCATGCTGGTATGCAGTTACATGTTCCACTCCGATGTGCTTGTCCAACTCAGTCTCAAATTTCCAGTGGCATAAAGTATTTACTAACTTACCCAGTTGATTGGGGTGATGATGTTTCCTCTCTTTCTACAAGATTCAAAGTGAGTTCAAGTTCTGTACTTGAAACTAATGTTATTACCTCACCCACTCTTTATCCATTCACAACTATTCTGATTCCCTTACCTACAGAACCTGACAGCTCAACCACCATAATTCACCCTGGTCGACCACCAAAATTTTCTCCTCCTGTTTCCTCTCCCAAAAGAAGCAAGTCAAAAACAAGACTCTATGTTGCTGTTGCCACCACAGGGGGGTTCGTTCTCGTTGTGTGTGTGGTTTTGTTTTCTGTGTTTCTATTGAGGAAGAGATTGGAGACTTTCGTTGAGGAAGGTGACATGAGAAAAATCAAGTGGAAGTCTTCAGAAGATATTCGTGATGAGATTGCAAGCATTGAGCATGTTTCTAAAGAGTACAGATTCGAGGAGATAAAGGAGGCGACTGAGAATTTCAGTTCAAAGAACAGAATTGGAGGCTCTTCTGTGTATAGGGGAGTGTTTGGAAAGGAGATCTTGGCTGTGAAGAAAATGAGTACAGATGCGTCCAAGGAAGTGAATATATTGAAGAAGATCAATCATTTCAACGTCATAAAGCTGCAAGGGTACTGTAAAAACGAAGGCTGCTTCTACCTTGTTTTCGAATACATGGAGAATGGTTCTCTAAGAGAGTGGCTAGAAAAAAACATAGCCATGGAGAAGTACCAGAGTTGGGGTAAGAGGATCCAGATTGCTCTGGATATTGCCAATGGACTTCAATATCTTCACAACTTCACTGAACCTTGCTACGTGCACAAGGACATCAATACCAGCAACGTTCTACTAAACAAGAACGCGAGGGCCAAGATTGCAAATTTTCGTCTCGCAAAAGAGTCATCAGAAGGGGATAATATAACTTGCACATCACAGGTTCTGGTAGGAACTAGAGGTTATATTGCTCCAGAATATGCAGAAGCAGGCTTGGTGAGTCCCAAAATGGACGTGTACGCCTTTGGAGTGGTGTTGCTGGAACTGATCACAGGGAAAGATTCTATCATAGAACAAGCTGGAAGTGAAGTAACGCTTTCTACAGTCATAGGGTCTGTCATGGCAAAGGACGACGACGACGATGCAGAAGCCAATCTTAGTTCGTTCATTGATCCTAAACTTACTGGGAGCTGTGGGAAATCATGTGCCATTGAGCTAGCTAAAATTAGTGTAGCCTGCTTAATCCAAGAACCAGCAAGGAGACCAAGCATGGCAGACATAGTTTCTAGCTTATTAAGGATACAAACGAATTATGTCGTGCTTCCGAGAATGTCATCACCCACCATAAATCGTGACAGTCCACGCATGGGGCGGTGA 1914 0.4274 MKQFLNLIPLFILYFVCSNVRAEQNYSGNSVLSCSIEDENGPSSAFLYTCNGLSKSCPTFLIFKSQPPYNNVTSISNLTSSDPEKLAVINNVSVFTVFPTGKEVIVPVNCYCKTKDYYQADTNYTLPTIQTYFTIANDTYEGLSTCNSLLRYNPYGALDLHAGMQLHVPLRCACPTQSQISSGIKYLLTYPVDWGDDVSSLSTRFKVSSSSVLETNVITSPTLYPFTTILIPLPTEPDSSTTIIHPGRPPKFSPPVSSPKRSKSKTRLYVAVATTGGFVLVVCVVLFSVFLLRKRLETFVEEGDMRKIKWKSSEDIRDEIASIEHVSKEYRFEEIKEATENFSSKNRIGGSSVYRGVFGKEILAVKKMSTDASKEVNILKKINHFNVIKLQGYCKNEGCFYLVFEYMENGSLREWLEKNIAMEKYQSWGKRIQIALDIANGLQYLHNFTEPCYVHKDINTSNVLLNKNARAKIANFRLAKESSEGDNITCTSQVLVGTRGYIAPEYAEAGLVSPKMDVYAFGVVLLELITGKDSIIEQAGSEVTLSTVIGSVMAKDDDDDAEANLSSFIDPKLTGSCGKSCAIELAKISVACLIQEPARRPSMADIVSSLLRIQTNYVVLPRMSSPTINRDSPRMGR 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0901 637 Pfam LysM domain 195 232 IPR018392 -
Lele04g0901 637 SUPERFAMILY Protein kinase-like (PK-like) 325 611 IPR011009 -
Lele04g0901 637 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 34 - -
Lele04g0901 637 Pfam Protein tyrosine and serine/threonine kinase 368 610 IPR001245 GO:0004672|GO:0006468
Lele04g0901 637 Gene3D Phosphorylase Kinase; domain 1 304 406 - -
Lele04g0901 637 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 10 616 - -
Lele04g0901 637 ProSiteProfiles Protein kinase domain profile. 294 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g0901 637 FunFam PTI1-like tyrosine-protein kinase 3 407 619 - -
Lele04g0901 637 Gene3D Transferase(Phosphotransferase) domain 1 407 621 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0901 Lele-ChrLele04 5551053 5552966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0901 10 613 Receptor kinase-like Gene Family AT2G23770 39.711 2.68e-128 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lele04g0901 PK_Tyr_Ser-Thr 5.1e-38 CL0016