LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele04g0895	ATGTTGAGGGATGAAACTATCGGTTCGAGAAGCGCGAGGCATAGAGCCGCCGTCTCTGCGGCATCAAATAAAGTTCTGGTGGCCGTGAAGGTGGAGCGGGTGATCTCCAAGACCGCATTGACCTGGGCACTCACTCATGTCGTTCGCTCCAGCGATTGCATCACGCTGCTCGCTGTATACTGTGCCGAGAAAACTGGCAGAAGATTCTGGCATTTTTCGAGATTGGCAGGAGATTGCACGAATGGACGGCGGGAAAAGTTGCCGGAGCGGATTCATGAAATCTCCGAGTCTTGTGCGCAGATGGTGCTTCAGTTGCACAATCAGACAGAGGTGAGGGTGAAGATCAAGGTGGTCACGGGAACACCCAGTGGTGCGGTGGCAACTGAAGCAAGATGTAGTGGGTCTAATTGGGTCATACTGGACAAGAAGTTGAAACAAGAGGTGAAGCAATGCATGGATGAACTCCAATGTAGTATCGTGATGATGAATGGTTCACAGCCAAAAGTTTTGAGGCTTAATTTAGGGTCATCTGATGAATTCCAAACCCCTACCTTTTCTACTGCCTCTTCCCCAGGAATTGATATTGGAAGGCTACGAGGTCACCGATTGAAGCCCTCCACCCCAGCCAGCAGCCCTGAAGAAGAAGCTACTTCTCATACAGCATCTACCTTGGTAAATTCAGGGTCATCTTCTGACACTATGACCTCTTTTTTTCTGGTCTACGAACAAAATCCTCTGTTCGAGGGTCTGGGTCCACAGAGAAGGAAACAGAGACCAATCAATGAACCCAAAAATTTCGACGACCAACCCCCATTAGCCTTAGAATTGGTCAGGGAAAGGATTAACCACACTTTGACCAAATCCCCGGTATCCTCTGTGGTTAGTGATGAGAAAAGTGTGTTTTGGAGTCCTCAAAATCACCTTGTCGATGAGAAGCCTCAAATAACAGAAAACACTACAATTAGTCGAAGATCTAAATCTCCCACTTCTAAAACTTTACTTGAAAGATTTGTACATTGTGATCAGGAGATGTGGAGTGATGAAGTAGGACATGAGCAAGCTCAAAGTGGAAATTATGTTGTAAAATCATGCATCAAGTATGCCATTCCTGCAGTCAGAACTTCCTCAGTACCTCGTCCCCTATGCTCACACTGTCAAAACAAAGCACCAGTTTTTGGAAAACCTCCTAGACGCTTCCACTACAAAGAATTAGGGGAAGCTACTGATATGTTTTCAGATATGAATTTTTTGGCTGAAGGTGGATTTGGGATAGTTCACAAGGGAGTGCTACGAGATGGTCAGGTCGTTGCAGTGAAACAGTTAAAGTTTAGTGGCTCTCATGCAGATCTTGATTTCTGTAGGGAAGTCCGAGTATTGAGCTGCGCACAACACAGAAATGTTGTGCTGTTGATAGGATTCTGCGTGGAAGGCGATTTGAGGATATTAGTCTATGAGTACATATGCAACGGATCCTTAGATCTCTATCTGCATGGAAAGAACAGAGGCGCCCTAGATTGGAACTCACGCTTAAAGATAGCAATAGGAGCTGCACGAGGACTACGCTACCTTCATGAGGATTGTAGAGTGGGCTGTATAGTGCACAGAGACTTTCGACCCAGGAATATCCTCTTAACCCATGATTTTGAACCTGTGATGGCGGATTTTGGCCTTGCAAGGTGGCAGTCGGAATGGAACTTAAATGCTGATGATCGAGTCATTGGAACTTCAGGGCCCAGGTATCTTGCCCCGGAGTATCTTGATGCTGGAAATCTTACATATAAAGTAGATGTGTATGCATTTGGAATTGTCTTGTTAGAGTTAATAACAGGTCGAAGAATTAGTGAGTTGGAACAAAACAACGGACCCTCGTTTCTTTCAGAATTCTTTCAACCCCTGCGCATGTTACAATCCAATCATATATTAGAAAACCTCCAAATTCTGAATCCATGCTTGGAGTTCGGGGCGTCACGGGAATTGAATCTTAAGTTACAAGCAATGGCCCGAGCTGCTTCCTTGTGTCTACGTCCAGATCCTGATGCCAGACCCCCAATGTCGAAGATCCTCAGAATGCTGGAAGGGGGCGATCCAGTTCGTCCTATGGGTTTAGACCTAAACTCGGTTGGTAACGCAAGTGGCCATTTAAGAGGACTGACGTCCCACACTCAACCTCAAGGTACAAGAAGCCACTCTCGTAGGCTCTCACATTGA	2208	0.4601	MLRDETIGSRSARHRAAVSAASNKVLVAVKVERVISKTALTWALTHVVRSSDCITLLAVYCAEKTGRRFWHFSRLAGDCTNGRREKLPERIHEISESCAQMVLQLHNQTEVRVKIKVVTGTPSGAVATEARCSGSNWVILDKKLKQEVKQCMDELQCSIVMMNGSQPKVLRLNLGSSDEFQTPTFSTASSPGIDIGRLRGHRLKPSTPASSPEEEATSHTASTLVNSGSSSDTMTSFFLVYEQNPLFEGLGPQRRKQRPINEPKNFDDQPPLALELVRERINHTLTKSPVSSVVSDEKSVFWSPQNHLVDEKPQITENTTISRRSKSPTSKTLLERFVHCDQEMWSDEVGHEQAQSGNYVVKSCIKYAIPAVRTSSVPRPLCSHCQNKAPVFGKPPRRFHYKELGEATDMFSDMNFLAEGGFGIVHKGVLRDGQVVAVKQLKFSGSHADLDFCREVRVLSCAQHRNVVLLIGFCVEGDLRILVYEYICNGSLDLYLHGKNRGALDWNSRLKIAIGAARGLRYLHEDCRVGCIVHRDFRPRNILLTHDFEPVMADFGLARWQSEWNLNADDRVIGTSGPRYLAPEYLDAGNLTYKVDVYAFGIVLLELITGRRISELEQNNGPSFLSEFFQPLRMLQSNHILENLQILNPCLEFGASRELNLKLQAMARAASLCLRPDPDARPPMSKILRMLEGGDPVRPMGLDLNSVGNASGHLRGLTSHTQPQGTRSHSRRLSH	735

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele04g0895	735	Gene3D	Phosphorylase Kinase; domain 1	373	486	-	-
	Lele04g0895	735	Gene3D	HUPs	9	177	IPR014729	-
	Lele04g0895	735	MobiDBLite	consensus disorder prediction	249	270	-	-
	Lele04g0895	735	FunFam	Os07g0541700 protein	487	575	-	-
	Lele04g0895	735	MobiDBLite	consensus disorder prediction	210	229	-	-
	Lele04g0895	735	SUPERFAMILY	Protein kinase-like (PK-like)	391	692	IPR011009	-
	Lele04g0895	735	ProSitePatterns	Tyrosine protein kinases specific active-site signature.	532	544	IPR008266	GO:0004672\|GO:0006468
	Lele04g0895	735	Pfam	Protein tyrosine and serine/threonine kinase	416	654	IPR001245	GO:0004672\|GO:0006468
	Lele04g0895	735	MobiDBLite	consensus disorder prediction	711	735	-	-
	Lele04g0895	735	PANTHER	OS01G0750732 PROTEIN	258	694	-	-
	Lele04g0895	735	MobiDBLite	consensus disorder prediction	182	229	-	-
	Lele04g0895	735	ProSiteProfiles	Protein kinase domain profile.	411	698	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele04g0895	735	MobiDBLite	consensus disorder prediction	703	735	-	-
	Lele04g0895	735	FunFam	Adenine nucleotide alpha hydrolase-like domain kinase	383	486	-	-
	Lele04g0895	735	Gene3D	Transferase(Phosphotransferase) domain 1	487	696	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele04g0895	Lele-ChrLele04	5505854	5512300	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele04g0895	399	692	Trihelix Transcription Factor Family	AT5G38560	43.581	1.45e-71	244

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_PERK-2	Lele04g0895		PK_Tyr_Ser-Thr	8.1e-41	CL0016