Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0892 ATGTTTTTAAGATCCCCCCATCTAGAGTGGGACCTACTTGGTGACCTTGAGAAAATTTGTGCCCCTCACGGCATTTGCTATATTTTTTGTCTTACTGACAAAAATGATCGATCGTCCTGTTTGAAGTCTCCACCAATTAGTAAAATTAGCATAATTTCCAAGATTCCCCCCATACACAGCACCAGAAACCACTTTACCACGGCCAAGGACATGATAATCCGATCAAGCGTACCGTTAGGCGTCATAGGACTACTGTTGCTCTTTCTCTACCTTTTCTCAAGAAGCCATCGTAGAAAAAAAACTACGACAAGAGAAGCAGCACCGGTAGCTGGCGGCGCGTGGCCTGTGATCGGGCACCTCCACCTCTTGGGTGGGCCAGAGCCACCGCACATAACCTTAAGCAAGATGGCCGACAAATACGGACCAATGTTCTCCCTAAGGCTCGGGGTTCACCCAACTTTGATTGTGAGCAGTTGGGAGATTGCCAAGGAATGCTTCACCGTGAACGACAGAGCTTTTGCTAGCCGTCCCAAATTCGTAGCCGGCGAAGTTATGGGCTACAACTACAGCCTGCTCGGAGCCACTCCCTACGGATCCTACTGGCGTCACGTGCGCAAGATCGCCACGTTGGAGGTCCTATCCAACCATCGCCTAGAGATGCTCAAATATGTACGAGAGCACGAGGTTAAGTCCGCCATGAAGGATACCTACGATCGTTGGTTAGAGTTGAACAACAGTAGTGGTCAGAATGTAGAAGCAGTGCCTCTGTCGTGTAAGATGGAGAAATGGTTTGGAGACATAACCTTGAACGTTGTGTATAGGATGGTGGTAGGAAAACGTTTTGCTGAGACGGAAGGGAACGAAAGGATTCGGAAAACACTGAGGGATTTGTTCGACCTAAGTGGAGCATTCTTGATATCAGACGCATTGCCGTATTTGAGGTGGCTGGATTTGGGTGGCCAAGAGAAGGCCATGAAGAAGACAGCCAAAGAGTTGGACCAGTTTGTTCAGTTTTGGGTGGATGAACACAGACGCAACAGGGACGTTGGTTCAGGCAAGTCTAAGCACGGCGACTTCATGGACGTGCTTATTTCCAACGCTGATGAAGCTGAAATGATTGATGGCTACGATGCTAACACGATGATTAAAGCTACATGCCTGGTCCTAATTTTAGCGGCAACAGACACAACAACGGGGACACTAACTTGGGCTCTGTCTTTGCTAATGAACAACCGTGAAATCCTGCAGAAAGCAGTAGATGAAGTGGACGAACAAATTGGGGGAGAAAGGTTGGCATTAGAATCAGACTTAAAGAAACTTCCTTACCTGCAAGCCATCATCAAGGAAACGTTGCGCCTGTACCCAGCCGCACCACTGAATATGCTGCACAAGTCTATGGAAGACTGCACCGTGGCTGGGTACCACGTACCGTCCGGCACGCACCTCTTGACGAACCTCTCAAAAATCCATCGAGACCCACTGGTATACGAAGATGCGTTGGAGTTTAGGCCAGAGAGATTCCTCAATACTCACAAAGGTGTGGACTTGAGAGGCCAAAACTTTGAACTGATTCCTTTCGGTGCGGGCAGAAGAATGTGCCCCGGAGTCTCATTTGCTCTTTTAATGATGCAACTTACACTCGCCAATTTGCTGCTTGGCTTCGATATTTCAACTGCTGATAACAAACCAGTGGATATGCGAGAACAGGTTGGCCTCACCAGCATCAAAGCCTCACCTCTTCAAGTCCTCCTTACGCCACGTCTCTCCCCTCATCTTTACGCATAA 1785 0.4846 MFLRSPHLEWDLLGDLEKICAPHGICYIFCLTDKNDRSSCLKSPPISKISIISKIPPIHSTRNHFTTAKDMIIRSSVPLGVIGLLLLFLYLFSRSHRRKKTTTREAAPVAGGAWPVIGHLHLLGGPEPPHITLSKMADKYGPMFSLRLGVHPTLIVSSWEIAKECFTVNDRAFASRPKFVAGEVMGYNYSLLGATPYGSYWRHVRKIATLEVLSNHRLEMLKYVREHEVKSAMKDTYDRWLELNNSSGQNVEAVPLSCKMEKWFGDITLNVVYRMVVGKRFAETEGNERIRKTLRDLFDLSGAFLISDALPYLRWLDLGGQEKAMKKTAKELDQFVQFWVDEHRRNRDVGSGKSKHGDFMDVLISNADEAEMIDGYDANTMIKATCLVLILAATDTTTGTLTWALSLLMNNREILQKAVDEVDEQIGGERLALESDLKKLPYLQAIIKETLRLYPAAPLNMLHKSMEDCTVAGYHVPSGTHLLTNLSKIHRDPLVYEDALEFRPERFLNTHKGVDLRGQNFELIPFGAGRRMCPGVSFALLMMQLTLANLLLGFDISTADNKPVDMREQVGLTSIKASPLQVLLTPRLSPHLYA 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0892 594 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 526 535 IPR017972 GO:0005506|GO:0016705
Lele04g0892 594 PANTHER CYTOCHROME P450 82C3-RELATED 85 593 - -
Lele04g0892 594 FunFam Cytochrome P450 82C4 97 585 - -
Lele04g0892 594 PRINTS E-class P450 group I signature 381 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele04g0892 594 PRINTS E-class P450 group I signature 533 556 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele04g0892 594 PRINTS E-class P450 group I signature 161 182 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele04g0892 594 PRINTS E-class P450 group I signature 523 533 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele04g0892 594 PRINTS E-class P450 group I signature 137 156 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele04g0892 594 PRINTS E-class P450 group I signature 401 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele04g0892 594 PRINTS E-class P450 group I signature 485 509 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele04g0892 594 PRINTS E-class P450 group I signature 267 285 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele04g0892 594 PRINTS E-class P450 group I signature 444 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele04g0892 594 Gene3D Cytochrome P450 92 583 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele04g0892 594 PRINTS P450 superfamily signature 524 533 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele04g0892 594 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele04g0892 594 PRINTS P450 superfamily signature 533 544 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele04g0892 594 PRINTS P450 superfamily signature 392 409 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele04g0892 594 Pfam Cytochrome P450 112 578 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele04g0892 594 Coils Coil 405 425 - -
Lele04g0892 594 SUPERFAMILY Cytochrome P450 113 587 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0892 Lele-ChrLele04 5498715 5501705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0892 84 593 Cytochrome P450 AT4G31940 49.234 1.24e-175 506