Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0863 ATGTCAACCAAGAGTGAACACCATACGGTCCCCCTTTCTGTGCTCCTGAAGCGTGAATCAGCAAGCGAGAAAATTGAAAAACCAGAAATTCAGCATGGTCAAGCAAGCCATAGCAAAAAGGGAGAGGACTTAACGCTACTAAAAACGGAATGCCAGAGGGTGGTGGGGGACGGGGTTTCGACGTATTCTGTTTTCGCACTATTTGATGGACACAAAGGATCTGCTGCTGCTATTTATGCCAAGGAGAATCTCCTAAATAATATTTTAAGTGTGATTCCTTCGGATCTTAACAGAGATGAGTGGATAGCAGCTTTGCCTCGGGCTTTAGTTGCAGGCTTTGTGAAAACTGATAAAGATTTTCAAGAGACAGCGCAAACATCAGGAACAACTGTGACCTTTGTGATTATAGAAGGATGGGTTGTCACTGTTGCATCTGTTGGTGATTCCCGATGCATATTTGAACCTTCTGAAGGTGGGCTTTATTACCTATCGGTGGATCACAGACTAGACACCAATGAAGAGGAGGTGACACGTATAACAAGTAGTGGGGGTGAGGTTGGTCGTCTAAATACTGGTGGAGGTTCAGAGATTGGTCCTTTGAGATGTTGGCCTGGTGGCTTGTGTCTTTCAAGATCTATTGGTGATATGGATGTTGGACAATTCATTGTTCCTGTACCTTACGTAAAGCAAGTGAAGCTGTCCACATCTGGAGGCAGACTTATCATCTGCAGTGATGGTGTTTGGGATGCTCTATCTGCAGAAGCAGCCCTTCATTGTTGTCGTGGGATGTCACCAGAGGTTGCAGCACCGCATATCGTTAAAGAAGCGGTACAAGCAAAGGGACTTAGAGATGATACAACCTGCATTGTTATTGATATTTTGCCCCCCGAGAAACCACCTGCTCCTCCTCCGACACATGCTAAAAGACCAATGAAAGGAATGTTTAGATCCATGTTTCGGAGAAAGTCTGCAGAATCATCTTCTTATAACGAAAAAGATTATATGGAGCCTGATGTGGTAATGGAGCTGTACGAGGAAGGATCTGCTATGCTTTCAGAGAGGTTAGATACAAAATATCCGGTCTGCAACATGTTCAGGTTGTTTACATGTGCAGTCTGTCAAGTTGAGATGAAGCCTGGGGAGGGTATATCAATACACGAAGGGGCATCCAACCCCGCAAAATTGCGTCCCTGGGAGGGTCCATTCCTTTGCCGAAGTTGCCAAGACAAAAAAGAAGCCATGGAAGGGAAAAGAAAATTAGGTGATTTGATAACCCTCTCTCCATCACAGACACATTTCTATTTTCTGCCTTGCTATGGACAGTGCTTCAGAGTCAGAAGATTCTCAATTGCATGTTATTATATGATTTCTGATTTGGAGGAGTGGAATAGCAACCGCCCAAGTGTTGTGGAAGGCTGCGTTAAACGCTCTCTTTTGTTCTCTCTCCCTCTCTCTCCCCTAGTTCCTCTGCTTTTCCAATCCCTTTATCACTCCCAAAGCTTGGTTAATATTCCATACATACATCAAGAAAAAAGAGAATCTCTCCTACCGAAAAGAAAAAGAAGAGATTGTAGAGCGAGAACCTCAGACACTGCATCAAATCTTGTTAGTGTTAGGAGGGAAATCTTTGTCATGGAAAAGCATCAGTGCCAAAATTACGCAGAAAACGATGTGGAAAAGATAATTGAAGGCAAATCAGCAAAGCAATCATCGTCTACAGAGTCCCCTGCTTCCGCATCCTCCTCTCCTTCGCACGAATTCTCCTTCTCTGTTTCTCTGTACTCTTCTTCCTCAACTACAAACCCTACTACTACTCATAAATCTGCAACTTCACCTAATTCATTTGCACTTGATTTATCTCCTGCTGATGACATTTTCTTCCATGGCCACTTGCTTCCTCTTCACTTCCTTTCCCACCTCCCTGTTTCTCCTCGTTCTTCCACCAATTCCATGGACAGTTTCACCCTCCCCATCACTGACTCAGTACAAGATGAAATACCCAACAACGGAGATCTCTCTGGAAGCAACATGGTCATGGACAACAATGGAAGAACAAAGGAAGAAGAAGGAAGAAGCAAGTCCAAATCTTTTTCATTATTCCGGTTAAGAGGGCGAAAAGGGTGTGAAGAACTCAGAGATAAGGAAGAAGAAACAGAGAAGCAGAAAAAGAAACAGAGGTTTCAGGTTGTCCATGTGTTGAAGAAGTACTTAAGAATGGTGCAACCCTTAATGTCAAGTTTTACAGGTAGAAGACAGAGAATTGGAGTCCGTGGACAGAGTTATTCATATTCAGAGAATTTGAGTTTCAGAAATAAGTCAGATTTGAGAGGAAGGAGAGGAGAATATTCAGCACCAGCATCAATAAGAACATCTCCCAGTAATAGCGGCCTCCTTCTTCCTACTATGAATCTTCCTTCTGCTAATGATAGTACCATGGAAGAGTTGCAGGCTGCCATTCAAGCCGCCATTGCTCACTGCAAAAACTCAATTGCAGAAGAAGAGAAACTCAAATGCTGA 2517 0.4346 MSTKSEHHTVPLSVLLKRESASEKIEKPEIQHGQASHSKKGEDLTLLKTECQRVVGDGVSTYSVFALFDGHKGSAAAIYAKENLLNNILSVIPSDLNRDEWIAALPRALVAGFVKTDKDFQETAQTSGTTVTFVIIEGWVVTVASVGDSRCIFEPSEGGLYYLSVDHRLDTNEEEVTRITSSGGEVGRLNTGGGSEIGPLRCWPGGLCLSRSIGDMDVGQFIVPVPYVKQVKLSTSGGRLIICSDGVWDALSAEAALHCCRGMSPEVAAPHIVKEAVQAKGLRDDTTCIVIDILPPEKPPAPPPTHAKRPMKGMFRSMFRRKSAESSSYNEKDYMEPDVVMELYEEGSAMLSERLDTKYPVCNMFRLFTCAVCQVEMKPGEGISIHEGASNPAKLRPWEGPFLCRSCQDKKEAMEGKRKLGDLITLSPSQTHFYFLPCYGQCFRVRRFSIACYYMISDLEEWNSNRPSVVEGCVKRSLLFSLPLSPLVPLLFQSLYHSQSLVNIPYIHQEKRESLLPKRKRRDCRARTSDTASNLVSVRREIFVMEKHQCQNYAENDVEKIIEGKSAKQSSSTESPASASSSPSHEFSFSVSLYSSSSTTNPTTTHKSATSPNSFALDLSPADDIFFHGHLLPLHFLSHLPVSPRSSTNSMDSFTLPITDSVQDEIPNNGDLSGSNMVMDNNGRTKEEEGRSKSKSFSLFRLRGRKGCEELRDKEEETEKQKKKQRFQVVHVLKKYLRMVQPLMSSFTGRRQRIGVRGQSYSYSENLSFRNKSDLRGRRGEYSAPASIRTSPSNSGLLLPTMNLPSANDSTMEELQAAIQAAIAHCKNSIAEEEKLKC 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0863 838 SMART PP2C_SIG_2 46 293 IPR001932 -
Lele04g0863 838 CDD PP2Cc 62 293 IPR001932 -
Lele04g0863 838 Pfam Protein phosphatase 2C 57 277 IPR001932 -
Lele04g0863 838 Gene3D - 32 298 IPR036457 -
Lele04g0863 838 ProSiteProfiles PPM-type phosphatase domain profile. 24 293 IPR001932 -
Lele04g0863 838 Coils Coil 708 728 - -
Lele04g0863 838 SMART PP2C_4 21 291 IPR001932 -
Lele04g0863 838 MobiDBLite consensus disorder prediction 777 805 - -
Lele04g0863 838 MobiDBLite consensus disorder prediction 682 696 - -
Lele04g0863 838 MobiDBLite consensus disorder prediction 565 584 - -
Lele04g0863 838 MobiDBLite consensus disorder prediction 786 805 - -
Lele04g0863 838 MobiDBLite consensus disorder prediction 661 696 - -
Lele04g0863 838 MobiDBLite consensus disorder prediction 661 681 - -
Lele04g0863 838 PANTHER MEMBRANE-ASSOCIATED KINASE REGULATOR 4-RELATED 562 838 IPR039620 GO:0005886|GO:0019210
Lele04g0863 838 FunFam probable protein phosphatase 2C 12 32 299 - -
Lele04g0863 838 SUPERFAMILY PP2C-like 38 293 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0863 Lele-ChrLele04 5280963 5289136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0863 1 422 PP2C-type Phosphatase Gene Family AT1G47380 78.538 0.0 710
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele28g0896 28 5781445 5782497 Lele04g0863 04 5280963 5289136 CCT
Lele25g0905 25 5785238 5789031 Lele04g0863 04 5280963 5289136 CCT
Lele27g1173 27 18894160 18897949 Lele04g0863 04 5280963 5289136 CCT
Lele04g0863 04 5280963 5289136 Lele04g0863 04 5280963 5289136 ECH
Lele02g0847 02 5151663 5155391 Lele04g0863 04 5280963 5289136 hybridization