Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0862 ATGCAAGCGATGGAGAGGCTAGGCAACTACATTAGTCGGAGCATGAACACTGTTTCCGGCCCTTTTCATCCTTTTGGCGGCGCTGTAGATATTGTTGTAGTTGACCAGCGAGATGGGAGCTTCAAGTCGTCGCCATGGTACGTTCGATTTGGGAAATTTCAAGGTGTTTTAAAAGCAAAGGAGAGAATGGTCAACATTAGTGTTAATGGAGCAGAAGCTGATTTTCATATGTATTTGGATCATAAAGGAGAAGCATTCTTTATTAGGGAAATGGATTCTGAAGAGGGAGAATCTATATTATATCCATCATCTTCTAGCGACGAGACAGATAGCCGCCCTCAGGATAATAAGCGCCCTTTGAAGTCCGAAAGTTGTAATTTTGAGACAGACAAGTCAAATTCAGGTGCTCATGTAGATATAAACAATGGTAAACTATTGGCCGGGACTAATTCTCGCCGATCACGGCTTCTTGGTTTTGTATTTGATCAAAGGTCGACGAAGGGCGATGATGGCATTTGCAGGGAAGTAGAACTAAACAGGGTAGATTCATTGGAGCGTGCCGAGATTGCAGCTAACCTTTTGGAGTTAAAATGGTCTACAAATCTTGCAGGCTCTAAACCAGCTCGTAAAAATAGCATAAAAACTCGGCACAGCTCACCCTTCCACGATAACACTGAGAATGCTTCGTGCCAATGTAAATTAAACGAGGAAGCTTGTTGCTGCTCTAAGCAAGAAGGCAAGAGTTGTTCTAACTCTGAATTTGAAGGAACTGGCAAGGAGGAGAGGATAAACCCATCATATTTAACCACCCATGACAAAATGGTTGAAAATTTTGTTGCAGGTGAAAGCTTTACAGAAGGGAAAACAAAGGTGAGAGCGGGAGTATCAACAATAATTGATGTTGATGAGGATGCTGAAGTTAACCCAAATGGGAAGGAAGTTGCATTTGATAGCACTAGTTCTGATTTGCAAGTTGCATGTGTAAAGCTCGAAACACAGTTTGAAAAGCATCTGAGTGGAGAGGTCTCTGGAATTCCTGGGGAGGATTTTTCAGTAAATGGAGATGGGTCTTTTGCTTATTGCAAGACATCAGAGAGATCGACGTTTGACACGGATTGTTCCACTGATCAAACTCTCGAGGTGTTTTACCTTTCTAGTAGAGGATGTGAATGTCAACGAGTCCATGTGCAGGCTGAAATCTTACATGCCACATCTGTTCTCCTTCCTGAGGTCACAAAAAGTGAGGAAGACGTTAAAAATGTTGATCTCGGGATGCCAGTGGAAGCTTCTGGTGTTAATAACAATAATATGGCAAATGCTGAAGACCCAACAATGATGCCAAATCCTCAAATTTTCAATTTGGATCCAGAACTTTGTTCACTTGAGGAGGTTCAGTCAAATTGTGTTGCAGCAACTTCCTGTTACTGCTGCCTGGATAACCAAGTATTGGATGAGAATAAAAGGGAAAATGACGATTCAAGCATGTTATCATCTCCCCAGGTTTACGTTGGAGATTGTGTCCTTAGCAATGCTACAAGTAGACGTCCACCAAAGGAAGAACATACCCACATGTATAAATGCCAAATTACTGATCAGTGTAATGGGCCAATCTCCCCTGATTTTGTAGATGAAGATCATATTTCATATGTGGATAGCATTGAAAAAGTGAACGGGGTAGTTGATACAAATTGTGGTTCACAGTCATCTCGGGAAAGCTCAACCCCTGAAAGTCACATATATGACCTTCAAGAGTTTAGACAAACATGTCCCATAGTTATCCCTAGAAATAAGGCTGCTAGGGAGGAAGTTGACCTGCTGACAGGATCGTTGCCCAAGATGTCTTCTCATAGTGACAATCTTAAAAAAAACGGTGTTTCTCTTCCTTTAAGTCAATCCCTTGACTCAAAGTCCAAATCGTTGAAGTGGACATCTCCCGCCAAGAATTACTTGAAACGTATAAAATCAGACGGAGACAAAGAAAACCAGTTTCTGGATGAGGAGTTAGGTGACAAGGAGAACCATAGCTTTACAGACTTCAGGAGTACCGTTCATCCTCCCATTGGAGATCCATCGAGACTCAACCGTTCTCCTGGTGGAAACTGGGGTCTTTGGCCATTCTCCTTCAGGAGATCAAGATCTGGAAGGGCTGAGCAGCCTGCTCCCAGTGATGACAAAAATACTACTTCTGGCAATGCTTCAGAGGGTACAATGGGTACTGATGCAGAAAAAAATGAGCTCACGCCCAATCCAAGAAGAAAAAAGGTTAGGACAAAGACTCCAACGTCTGAACAGCTGGCATCCTTAAATCTCAAGAAAGGGAGGAATACAGTAACCTTCACATTCTCTACTGATATGCTGGGGAAGCAACAGGTTGATGCTCAAATATATATGTGGAAATGGAACACCCGTATAGTGATCTCAGATGTGGATGGGACAATTACAAGGTCAGATGTTCTAGGACAGTTCATGCCTTTGGTTGGAGTAGATTGGTCACAGACTGGGGTTGCGCATTTATACTCAGCTATCAAGGAAAATGATTACCAATTGCTTTTTCTTAGCGCTCGTGCAATTTCTCAGGCCTATAACACCAGACAATTCCTATTCAACCTTAAGCAGAATGGAAAAGTCTTACCTGATGGTCCTGTTCTTATTTCCCCAGATGGACTTTTTCCCTCCCTATATCGAGAAGTTATCAGAAGGGCTCCACATGAATTCAAAATTGCATGCTTAGAGGATATCAAGGCACTTTTTCCTTCAGATTGCAATCCATTTTATGCGGGTTTTGGAAATAGGAACACTGATGAAATCAGCTACCTTAAGGTTGGAATACCAAAAGGAAAAATCTTCATCATTAATCCAAAGGGAGAGGTTGCTGTAAACCATCTTCTTGATACAAAATCATACACTTCTCTTCATGCTCTCGTAAATGGAATGTTCCCCGCTACGAACTCATCTGAGCAGACTGCACTGCTTCTAAAATTACTTCGTTCTAATGGCAACTGA 3003 0.4209 MQAMERLGNYISRSMNTVSGPFHPFGGAVDIVVVDQRDGSFKSSPWYVRFGKFQGVLKAKERMVNISVNGAEADFHMYLDHKGEAFFIREMDSEEGESILYPSSSSDETDSRPQDNKRPLKSESCNFETDKSNSGAHVDINNGKLLAGTNSRRSRLLGFVFDQRSTKGDDGICREVELNRVDSLERAEIAANLLELKWSTNLAGSKPARKNSIKTRHSSPFHDNTENASCQCKLNEEACCCSKQEGKSCSNSEFEGTGKEERINPSYLTTHDKMVENFVAGESFTEGKTKVRAGVSTIIDVDEDAEVNPNGKEVAFDSTSSDLQVACVKLETQFEKHLSGEVSGIPGEDFSVNGDGSFAYCKTSERSTFDTDCSTDQTLEVFYLSSRGCECQRVHVQAEILHATSVLLPEVTKSEEDVKNVDLGMPVEASGVNNNNMANAEDPTMMPNPQIFNLDPELCSLEEVQSNCVAATSCYCCLDNQVLDENKRENDDSSMLSSPQVYVGDCVLSNATSRRPPKEEHTHMYKCQITDQCNGPISPDFVDEDHISYVDSIEKVNGVVDTNCGSQSSRESSTPESHIYDLQEFRQTCPIVIPRNKAAREEVDLLTGSLPKMSSHSDNLKKNGVSLPLSQSLDSKSKSLKWTSPAKNYLKRIKSDGDKENQFLDEELGDKENHSFTDFRSTVHPPIGDPSRLNRSPGGNWGLWPFSFRRSRSGRAEQPAPSDDKNTTSGNASEGTMGTDAEKNELTPNPRRKKVRTKTPTSEQLASLNLKKGRNTVTFTFSTDMLGKQQVDAQIYMWKWNTRIVISDVDGTITRSDVLGQFMPLVGVDWSQTGVAHLYSAIKENDYQLLFLSARAISQAYNTRQFLFNLKQNGKVLPDGPVLISPDGLFPSLYREVIRRAPHEFKIACLEDIKALFPSDCNPFYAGFGNRNTDEISYLKVGIPKGKIFIINPKGEVAVNHLLDTKSYTSLHALVNGMFPATNSSEQTALLLKLLRSNGN 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0862 1000 MobiDBLite consensus disorder prediction 610 638 - -
Lele04g0862 1000 MobiDBLite consensus disorder prediction 98 133 - -
Lele04g0862 1000 SMART lns2 804 960 IPR031315 -
Lele04g0862 1000 MobiDBLite consensus disorder prediction 110 125 - -
Lele04g0862 1000 Pfam lipin, N-terminal conserved region 12 96 IPR007651 -
Lele04g0862 1000 MobiDBLite consensus disorder prediction 745 759 - -
Lele04g0862 1000 MobiDBLite consensus disorder prediction 720 743 - -
Lele04g0862 1000 Pfam LNS2 (Lipin/Ned1/Smp2) 757 980 IPR013209 -
Lele04g0862 1000 SUPERFAMILY HAD-like 796 946 IPR036412 -
Lele04g0862 1000 MobiDBLite consensus disorder prediction 712 764 - -
Lele04g0862 1000 MobiDBLite consensus disorder prediction 609 638 - -
Lele04g0862 1000 MobiDBLite consensus disorder prediction 668 700 - -
Lele04g0862 1000 PANTHER LIPIN 1 982 IPR026058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0862 Lele-ChrLele04 5271318 5277665 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0903 25 5771105 5777581 Lele04g0862 04 5271318 5277665 CCT
Lele26g0909 26 5842400 5847919 Lele04g0862 04 5271318 5277665 CCT
Lele27g1175 27 18904952 18911556 Lele04g0862 04 5271318 5277665 CCT
Lele04g0862 04 5271318 5277665 Lele04g0862 04 5271318 5277665 ECH
Lele01g0863 01 4980702 4986524 Lele04g0862 04 5271318 5277665 hybridization
Lele02g0845 02 5133019 5139505 Lele04g0862 04 5271318 5277665 hybridization