Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0858 ATGGAGTGTGTTGAAGTGAAGGCGCCTCTCTCAGAATCATGTTCAAAGTGGTCTGAGGAGAAGCCAGCAATGGCAGAACGCTCTAAAGAAATTTCTTCTGAAGTTCTAAATCCACCAGACAATATCTATTCTTACATCGAAGCTCCAACCAATAATCAACTCAGCAACGGAAAAGTGAAATCGACCACAAATTTGACAGAGACCACTGAATTTACAGCATCACCACATGCTTTGGATGGTCATATTGCAGGCCAACATGAATTTTCTCCTATAGTTCATTCAACTTCAATCTCAAATACTATGGATGATGTGAAACAGAGAAGCAATATTCAGGAAATTGTTATTGGACATACTGAACCACAAGTTCAAGACTATAATATCTCGAATAGTATAACTGCCACTTATAGCATTGATGATCATAACCAAATCATATCAGCTTCCTATCATGAAACACAAGATTTGCAGAGTGTCCACAATGAACAAGAGAGTTATCCTCCTTTAAAGGTTGCGAGTTATCCGCCTTTAAAGGTCGCCGGTGCTGAAGATCATGATGAGGGTATACTTCCAGCTTCTTCTTTTGAGACAAAAGATTTTCAAAATGACCTCAATGAAGTAAAGTTTTATTCTCCTCAAGCACATGCTAGTGGTTCTGCTTTTGAAGCCTTGGAAATACTTCAGACTGATGATCATAATAATGAGATTGTACAATCATCTTCCACTTCTGAAGCAAATCATTTGCAAAATGACCACATTGAACAAAAGACTGATACACCTCAAGTAAATGTTGCCAGTGCCACAACTGAAGTCTTGGGAACGATTCACAATGACGATCATGTTGAAAGTATGCCATCAACTTCCTTTTTGGAACTAAAAGATTTGCAGAATGATCACAATGAATTAAATATCGATTCGCCGGATAAACAAGTTGCCAGTCCTGCCGTTGAAGTCCATGGAATGGTTAACACTAATGATCATGATGAGATTACAGAATCAATTTCCTCTTGTGGAGTAAGAGATTTGCAAGATGATCTCAACGAGCTAAAGATGAATCCACCTGAAGTACAGGTTATGAATGCTGCTAATACTGATGTCTTGGGAATGGATGAGACTCCCACACACGCTAAGCAGGTTGGCCATATTGATACAGCAGCTCCAATTGAATCTGTCAAAGCAGCTGTTTCTAAATTTGGAGGAATTGTGGACTGGAAGGCTCATAGAAACCAAACAGTGGAAAGACGCCAACATGTAGAACAAGAACTGCAGAAAGCACAAGAGGAGATTCCGGGGTATAGAAAACAATTTGAGGCTGCTGAACAGGCAAAAATCCGAGTATTAAAGGAGTTAGATAGCACTAAAAGATTAATAGAAGAACTGAAACTGAACTTAGAGAGGGCACAAACAGAAGAGCGCCAAGCAAGACAGGACTCAGAGCTGGCGAAGCTTAGAGTTGAAGAAATGGAACAAGGTATTGCAGATGGAGCCAGTGTCGCAGCCAAGGCACAACTTGAAGTTGCTAAAGCTAGGTTTTCAGCAGCCATTTCTGAACTAATGTTTGTGAGAGAAGAATTGGAAGGATTGCGCAAGGAATATGCTTCCTTAGAGACGGATAAAGACGTAGCTGTTAATAAAGCTGAAGAAGCTGTTCTTGCATCAAAAGAAGTGGAGAAGACAGTGGAAGAATTGACCATTGAATTAATTGCTGCAAAAGAGTCATTTGAATCGACACATTCTGCACATTTGGAAGCTGAGGAGAAAAGAATAGGAACAATCATGGCTAGAGATCAATATTCTCATAACTGGGAGAAGGAACTTAAACAGATAGAAGAAGAGATCCATAAACTGAGCCAGCATATTTTTTTAACAAAGGATCTCAAGTCTAAACTACACACAGCCTCTGGCGTGCTGCTTGATCTGAAAGCTGAATTAGCTGCTTATATGGAATCAAAAGTGATGCAAGAACATGATGTTGAAGGAGTTTCAGAAATAGAACCAGAGGAACTAGAGAAGAAAACACGTATTGTTATAGGGGCAATTGTGGCATCAGCAAGAAAGGAGCTTGAGAAAGTGAAGATCAATTTGGAGGAACGAACTAATGAGGTTAATTGCTTGAAGGTGACTGCTACATCATTAAAATCTGAACTTGAACAAGAGAAATCAACTCTTGCCACCATTAGGCAGAGAGAGGGAATGGCATCCATTGCGGTTGCTTCACTTGAAGCAGAACTAGAGAAGACTAAATCTGAAATAGCTGAAATACAAATGAAGGAGAAAGAGGCTAAAGAAAAAATGATTGAGCTACCTAAGAAACTACAAAAAGCAGCTGAAGATGCTGACCAGATCAACTTATTTGCTCAAGTAGCTCGTCAAGAGCTGCTAAAAGTGAAGGATGAGGCAGAACAAACCAAGGCTGCAGCAACTACAGTGGAAACCAAATTACTTGCAACTCAGAAGGAGATAGAGGCAGCTAGGGCTTCTGAGAAGTTGGCGATAGCAACGATCAAAGCATTGCAAGAGAGTGAATCAGCTAGAGAAAACCTTGATGCAGACCCTTCAAATGGGGTAACACTTTCTTTAGAGGAATACTATGAACTGAGCAAGCGTGCCCATGAGGCAGAAGAGCAAGCAAATTTGAGGGTTATAGCTGTGAATTCTGATATTGAGATGGCTAGGGAGTCTGAATTGAAAACCTTGGAAAGATTGGAAGAAGTGAATCAAGAGATGTCTGCCATAAGGGAATCTCTGAAGGTGGCAATGGATAAAGCTGAAAAGGCAACAGAAGGAAAATTAGCTGTAGAACAAGAATTAAGAAAGTGGAGGGCTGAACATGAACAGAGAAGAAAGGCTGGTGAGTCTGACCAAGGAGTGGTAAGCCAAACTCAAAGCCCTACGGTCAAGGAAGTAACTTTCCAAGAAGAAGCTCCCGAGGAAGGTAGTCCTGTGCATTATTTGTCAAGTTCAAAGTCTGATGTACATGAAAACAACGCTGACAATGGACCAACCCCAGAGAAAAAGAATAGTAAGAAGAAAAAGAGGTCATTATTCCCACGTGTTTTAATGTTCTTTGCTAGAAGAAAATCAACAAAGTCTTAG 3090 0.4029 MECVEVKAPLSESCSKWSEEKPAMAERSKEISSEVLNPPDNIYSYIEAPTNNQLSNGKVKSTTNLTETTEFTASPHALDGHIAGQHEFSPIVHSTSISNTMDDVKQRSNIQEIVIGHTEPQVQDYNISNSITATYSIDDHNQIISASYHETQDLQSVHNEQESYPPLKVASYPPLKVAGAEDHDEGILPASSFETKDFQNDLNEVKFYSPQAHASGSAFEALEILQTDDHNNEIVQSSSTSEANHLQNDHIEQKTDTPQVNVASATTEVLGTIHNDDHVESMPSTSFLELKDLQNDHNELNIDSPDKQVASPAVEVHGMVNTNDHDEITESISSCGVRDLQDDLNELKMNPPEVQVMNAANTDVLGMDETPTHAKQVGHIDTAAPIESVKAAVSKFGGIVDWKAHRNQTVERRQHVEQELQKAQEEIPGYRKQFEAAEQAKIRVLKELDSTKRLIEELKLNLERAQTEERQARQDSELAKLRVEEMEQGIADGASVAAKAQLEVAKARFSAAISELMFVREELEGLRKEYASLETDKDVAVNKAEEAVLASKEVEKTVEELTIELIAAKESFESTHSAHLEAEEKRIGTIMARDQYSHNWEKELKQIEEEIHKLSQHIFLTKDLKSKLHTASGVLLDLKAELAAYMESKVMQEHDVEGVSEIEPEELEKKTRIVIGAIVASARKELEKVKINLEERTNEVNCLKVTATSLKSELEQEKSTLATIRQREGMASIAVASLEAELEKTKSEIAEIQMKEKEAKEKMIELPKKLQKAAEDADQINLFAQVARQELLKVKDEAEQTKAAATTVETKLLATQKEIEAARASEKLAIATIKALQESESARENLDADPSNGVTLSLEEYYELSKRAHEAEEQANLRVIAVNSDIEMARESELKTLERLEEVNQEMSAIRESLKVAMDKAEKATEGKLAVEQELRKWRAEHEQRRKAGESDQGVVSQTQSPTVKEVTFQEEAPEEGSPVHYLSSSKSDVHENNADNGPTPEKKNSKKKKRSLFPRVLMFFARRKSTKS 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0858 1029 MobiDBLite consensus disorder prediction 981 995 - -
Lele04g0858 1029 Coils Coil 406 484 - -
Lele04g0858 1029 Coils Coil 597 617 - -
Lele04g0858 1029 Coils Coil 707 727 - -
Lele04g0858 1029 Coils Coil 897 941 - -
Lele04g0858 1029 MobiDBLite consensus disorder prediction 939 1016 - -
Lele04g0858 1029 Coils Coil 679 699 - -
Lele04g0858 1029 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 378 1023 - -
Lele04g0858 1029 MobiDBLite consensus disorder prediction 951 967 - -
Lele04g0858 1029 Coils Coil 735 762 - -
Lele04g0858 1029 Pfam Weak chloroplast movement under blue light 378 945 IPR008545 -
Lele04g0858 1029 Coils Coil 516 571 - -
Lele04g0858 1029 Coils Coil 784 804 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0858 Lele-ChrLele04 5247846 5251121 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele28g0228 28 1322606 1328160 Lele04g0858 04 5247846 5251121 CCT
Lele25g0898 25 5745443 5748503 Lele04g0858 04 5247846 5251121 CCT
Lele26g0905 26 5806522 5810999 Lele04g0858 04 5247846 5251121 CCT
Lele27g1181 27 18935644 18938710 Lele04g0858 04 5247846 5251121 CCT
Lele04g0858 04 5247846 5251121 Lele25g0873 25 5585800 5590462 CCT
Lele04g0858 04 5247846 5251121 Lele26g0885 26 5664529 5669839 CCT
Lele04g0858 04 5247846 5251121 Lele27g1206 27 19083783 19087627 CCT
Lele04g0858 04 5247846 5251121 Lele28g0866 28 5582052 5586724 CCT
Lele04g0858 04 5247846 5251121 Lele04g0858 04 5247846 5251121 ECH
Lele01g0861 01 4969567 4972831 Lele04g0858 04 5247846 5251121 hybridization
Lele02g0841 02 5113822 5117121 Lele04g0858 04 5247846 5251121 hybridization