Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0853 ATGGCTTCACTAACTAACTTGCCGTCACATACCCACCCTCGCACAAACCCTATGTCTTTCCACTTTTCTCCGCCAATTCTTTCTATCCGTTTACGTCTGAAAGTATCCTTGCTTCACGCTCGTCTCTGTGCCCTCAACACGGGTTCTGACGCCGATAATTTGCTCAGGAAGCCCGTCGTTTCTCCGGGTAAGGACATCTCTGAAATTTTGGAAGAAGATCATGACAGCGGCGTAAAGAGGGCCTTTGAAGATGATAGTGAACATGAGAGATGGGTTGACTGGGAAGACCAGATTTTGGAGGATACTGTTCCTCTAGTTGGTTTTGTGAGGATGCTTCTTCATTCTGGAAAATATGAAAGTGGAGATAGACTGATTCCAGAGCACGAGAATACCATTCTTGAGAAACTCCTTCCCTTTCATCCAGAATTTGAGAAGAAGAAAGGATGTGGAATTGATCACATAACGATTGGATATCATCCCAACTTTGAAAGATCAAGGTGTTTATTCATAGTACGAACAGATGGGGAGCTGGTTGACTTTTCATATTGGAAATGCATCAAAGGTCTGATCAGAAAGAATTATCCATTATATGCGGACAGTTTCATTCTCAGACATTTCAGACGGCGTCAGGGTAGGGGTTGGCCTTTAGTAGAGTTTATTATGTTAAAGATGGCCATAATGCTGGAAGGTGAAAATGACTCTACTCTATTGTTGATTGATGATTATCATTTTAATATTATTTTTTGCAATGCTGATTATGTATATAGTGGTACGGATTTTAGTGAGGCACCTCCAGAAAGAAAAGGGGGGCCATTGTTTTTTGTTATGGAGAGGAAAAGCTTCATGGCTGCATGTGAATTGCACTTTGGCATTATGGGAGATATCTTGTCTTCCACGTGTCGGCAAGACGACGCAGTGCGCTCTGCTTCTGTGTCTAGTTCTGAATGGACCATCTCCTTCCCCATGATTATCATTATCATCAGAGCATTTATCCCTGTCCGTTACCATGAACAGTCACTTAAAACTGAGTGCCACAATCACACAAATCAACATCCTCCTGATGCAATTTTGGAAGATAAAGGCTATCACGCGTCTGTTATGGAGATATGGAGACGTGTCGATGTTGCAAAGGGACACGTAGTAAAAGTGTCTTTCCAAAAAGGATGTGGGAGAGCGGAATCTGAATTTGTGCCCGTTGGAGTAGTATGTATTAAGCTTAGATCAGCTTCTGATTGTGCTCCACTCAGATTTCTCCAGATTGAGACCACAATGCACACGAAGAATGTGAAGAGCGACCCTGAGGTCGATGACAGCTGTGGCGAAAGGCAACCAGGGATTGTTTCCCTGGCAAGACAGCCGTCCGTCTACTCTCTGACGTTCGACGAATTCATGAATACCATGGGAGGTCCAGGAAAGGACTTTGGGTCCATGAACATGGACGAGTTGCTCAAGAACATTTGTACAGCTGAAGAAATGCAAACAATGGCGTCCACGAGCGGGGTTCAACCGGTGACCGGCATCTCTGGCGGTGGCCATTTGCAGAAACAAGGCTCATTGACACTGCCACGGAAAATTAGCCAGAAGACAGTGGATGAAGTCTGGAAGGATATCTCCACTGGTCTTGGAGGCCCCAATTTTCCTCAGAGGCAGCAGACTTTGGGAGAGATGACGCTGGAGGAGTTCTTGGTCAGAGCCGGCGTGGTAAGAGAAGATATACAATTAGGTGAAAAGCCAAACGGAGGGCTTTTTGCCGATTTTTCTTGGACAGGGAATCATAGTGGTTTAGAGATGAGTTATCCGCAGTTCAACAAGGGTGCAGGGTTAACGGGAAGCCTGATTCCCGGGAATAACAACGATCGTCTAACTCTTCCATCGTCCGCCAATTTGCCGTTGAATGTTAACGGGATTAGATCGAATCAGCAACAGTTGCCTAATTCACAGCCACCTCATCTGCAACTGCAGATACTTCCAAAGCCGCCTGCTATGCCTTATGCAACTCCAATGACATTAATGAACAATCAAGGAATCAAGAGCGGAATAGGGGGACTTGCTGATCAGAATATAAAGGGTAATATAGTTCCAGGTTCTGCACTGCATGTTGGAGGGTTCGATGGTATGGGTTTAGGACATGGACATGGGGGTGTTCCCGTAGCTACAGGATCCCCAGCGAATCAACTGTCGTGCGACGAAACCAGGAAGATTAGTGGTGATGCTTCGTCAGTATCGCCAGTTCCTTATGTATTCAATGGTGGTTTAAGGGGAAGGAAGAGCGGTGGAGCTGTGGAGAAGGTGATTGAAAGGAGGCAGAGGAGAATGATAAAGAACAGAGAATCAGCTGCTAGGTCGAGGGCTCGCAAGCAGGCATATACCATGGAATTGGAGGCAGACATTAAAATGTTAAAAGATGAAAACCAAGAACTTAAAAGGAAGCAGGCTGAAATAATGGAAATTCGAAGAAAACAAATTATGGAGATGATAAATATGCAGCGAGGTGTCAAGAAAAGACGCTTAAGACGAACTCAAACTGGACCATGGTAG 2538 0.4504 MASLTNLPSHTHPRTNPMSFHFSPPILSIRLRLKVSLLHARLCALNTGSDADNLLRKPVVSPGKDISEILEEDHDSGVKRAFEDDSEHERWVDWEDQILEDTVPLVGFVRMLLHSGKYESGDRLIPEHENTILEKLLPFHPEFEKKKGCGIDHITIGYHPNFERSRCLFIVRTDGELVDFSYWKCIKGLIRKNYPLYADSFILRHFRRRQGRGWPLVEFIMLKMAIMLEGENDSTLLLIDDYHFNIIFCNADYVYSGTDFSEAPPERKGGPLFFVMERKSFMAACELHFGIMGDILSSTCRQDDAVRSASVSSSEWTISFPMIIIIIRAFIPVRYHEQSLKTECHNHTNQHPPDAILEDKGYHASVMEIWRRVDVAKGHVVKVSFQKGCGRAESEFVPVGVVCIKLRSASDCAPLRFLQIETTMHTKNVKSDPEVDDSCGERQPGIVSLARQPSVYSLTFDEFMNTMGGPGKDFGSMNMDELLKNICTAEEMQTMASTSGVQPVTGISGGGHLQKQGSLTLPRKISQKTVDEVWKDISTGLGGPNFPQRQQTLGEMTLEEFLVRAGVVREDIQLGEKPNGGLFADFSWTGNHSGLEMSYPQFNKGAGLTGSLIPGNNNDRLTLPSSANLPLNVNGIRSNQQQLPNSQPPHLQLQILPKPPAMPYATPMTLMNNQGIKSGIGGLADQNIKGNIVPGSALHVGGFDGMGLGHGHGGVPVATGSPANQLSCDETRKISGDASSVSPVPYVFNGGLRGRKSGGAVEKVIERRQRRMIKNRESAARSRARKQAYTMELEADIKMLKDENQELKRKQAEIMEIRRKQIMEMINMQRGVKKRRLRRTQTGPW 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0853 845 Pfam bZIP transcription factor 767 819 IPR004827 GO:0003700|GO:0006355
Lele04g0853 845 Coils Coil 790 820 - -
Lele04g0853 845 Gene3D - 100 189 - -
Lele04g0853 845 Gene3D - 765 821 - -
Lele04g0853 845 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 765 816 IPR004827 GO:0003700|GO:0006355
Lele04g0853 845 Pfam Protein of unknown function (DUF3223) 111 186 - -
Lele04g0853 845 CDD bZIP_plant_BZIP46 767 821 - -
Lele04g0853 845 SMART brlzneu 763 827 IPR004827 GO:0003700|GO:0006355
Lele04g0853 845 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 449 845 IPR043452 GO:0003700|GO:0045893
Lele04g0853 845 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 770 785 IPR004827 GO:0003700|GO:0006355
Lele04g0853 845 SUPERFAMILY Leucine zipper domain 767 815 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0853 Lele-ChrLele04 5217291 5228050 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0853 449 845 bZIP Transcription Factor Family AT1G49720 45.146 4.39e-85 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele04g0853 DUF3223 3.9e-26 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0853 04 5217291 5228050 Lele04g0853 04 5217291 5228050 ECH
Lele01g0856 01 4947380 4951692 Lele04g0853 04 5217291 5228050 hybridization
Lele02g0835 02 5093108 5095129 Lele04g0853 04 5217291 5228050 hybridization