Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0845 ATGTCTCCAAGGAGATCCAGGATATCAGGATTGACCCTTCGCGTGACCCAACCCATGGAAGATCCGACTCGTATCCGGAAGCAGAGTCAGCAGCAGGGGGATGATAGCCAGAGAATTCACGTAGAGATTGGTAAAGATCACCTGATTTCTTATCCTGATAAGGCTGGTGGTTCATCGCATGGAAGTGGTGAGCAGGGTTCTATTTCTGTGCCTGAGGTTTCGCATTTGGGGTGGGGCCATTGGTACACTCTCAAAGAGCTTGAGGTCTCTACAAACGGGTTTGCGGACGAGAACGTCATAGGTGAAGGTGTCTACGGAATTGTTTATCGCGGGGTGTTGCAAGATGATACCAAAGTTGCGATTAAAAATTTGCTGAATAACAGGGGACAAGCTGAGAAGGAATTTAAGGTAGAAGGTGAAGCAATTGGGCGTGTTCGTCACAAGAATTTGGTGAGGTTACTTGGATATTGTGTTGAAGGAGCTCATCGGATGCTTGTGTACGAGTATGTTAACAATGGAAACCTAGACCAGTGGCTTCACGGAGATGTTGGGCCTTCTAGCCCTCTGACATGGGAGATTCGAATGAATATAATACTTGGAACAGCAAAAGGAGAGAAGCTATGTGACAACCCGTGTAATGGGAACATTCAGCTTGGTGTTCTTATCATGGAGATAATCTCTGGAAGAAACCCAGTAGATTACAGCCTGCCTTCAGCAGAGGTGAACCTGGTTGAGTGGCTGAAGTCCATGGTTGCTAACCGGAATGCAGAGGCGGTGCTCGATCCTAGGCTACCTGAGAAGCCTTCTTCAAGGGCACTGAAGCGTGGCTTATTAGTAGCTTTGAGATGTGTGGATCCAAATGCCCAGAAAAGGCCAAAGATGGGGCAAATTATACATATGCTTGAAGCTGATGAGTGCCCTTTTCGAGATGCGAGTGTGTAA 942 0.4724 MSPRRSRISGLTLRVTQPMEDPTRIRKQSQQQGDDSQRIHVEIGKDHLISYPDKAGGSSHGSGEQGSISVPEVSHLGWGHWYTLKELEVSTNGFADENVIGEGVYGIVYRGVLQDDTKVAIKNLLNNRGQAEKEFKVEGEAIGRVRHKNLVRLLGYCVEGAHRMLVYEYVNNGNLDQWLHGDVGPSSPLTWEIRMNIILGTAKGEKLCDNPCNGNIQLGVLIMEIISGRNPVDYSLPSAEVNLVEWLKSMVANRNAEAVLDPRLPEKPSSRALKRGLLVALRCVDPNAQKRPKMGQIIHMLEADECPFRDASV 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0845 313 SUPERFAMILY Protein kinase-like (PK-like) 218 301 IPR011009 -
Lele04g0845 313 MobiDBLite consensus disorder prediction 1 37 - -
Lele04g0845 313 FunFam Probable serine/threonine-protein kinase At1g01540 74 169 - -
Lele04g0845 313 ProSitePatterns Protein kinases ATP-binding region signature. 100 122 IPR017441 GO:0005524
Lele04g0845 313 Pfam Protein tyrosine and serine/threonine kinase 98 204 IPR001245 GO:0004672|GO:0006468
Lele04g0845 313 Gene3D Transferase(Phosphotransferase) domain 1 217 304 - -
Lele04g0845 313 ProSiteProfiles Protein kinase domain profile. 94 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g0845 313 Gene3D Phosphorylase Kinase; domain 1 69 169 - -
Lele04g0845 313 PANTHER OS01G0323000 PROTEIN 30 204 - -
Lele04g0845 313 SUPERFAMILY Protein kinase-like (PK-like) 75 204 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0845 Lele-ChrLele04 5170017 5171682 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0845 82 312 Receptor kinase-like Gene Family AT4G20450 31.673 4.41e-35 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Lele04g0845 PK_Tyr_Ser-Thr 8.6e-17 CL0016