Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0843 ATGGAAGAGCCTCAATGCTCCAGAGTCGCTTTGCCTGCCTCGCTCCCACCCGGTTGCCGTTTCTATCCTTCCGAAGAGCAGCTGCTATGTTACTACTTAGCCAACAAGAACGCCGGTGGTAATTTCCATGGTCGTGATCTGATCAGGGAGCTTGACCTGTACGATTGTGATCCTTTGCAATTGCCTGAAATTGCGTGCTTTTCCCATGGTTATCGCGGAAGGAAGAGGCATTGGTACTGTTATACTGCCAGGGTTTTGAAGGATGCTAGAAGGAAGACCAGGATGGTCAAGAGCGGGTATTGGATGAGAAAGGGAGGGGTTAGGAATGTTTTGAATGGCGGTGGGAATGTCGTCTTGGGCACCAGGACCACTTTCGTTTTCTATCTGGGGAATTGCCCCAAGAACGCCAGCAGGACGAATTGGATGCTGCATGAGTATGCATTAGTTGATCATCTCAAGGCTTCATTTGTTGTTTGTCGAGTATTTTTTAAAGCATGCCGTAAGAATAGTGTGTCAGAGAATGTTATGTGTTCCTGCGCAGAGGAAAGTTACTCAGCTGTACGTCACATTGGCATTCAGCATGATGGATGCGTTTCACCTGATATAATTGAGACTCAAATGCGTGGTGCCTGCTCCATTGATGGAAAGATTTCAGCGTCTCCCATGACACCTGCTAGTGAACTAGATGAGAATCAAATTGCAGCTGCATCAGCTTCTATCGCTACTTTCCAACGTTGTGCAGGTCCTCAAGACCATCCAACGGGAAGGTTTTCTGGACTTCCTGGTGGCGGTGCATTATTTGTTGAGGATTTGGCATCTCGGCAAGATTTATTTTCGATTCTAGAGGAGGATTTCATAGAGTTGGATGATCTAGCTTGA 879 0.4699 MEEPQCSRVALPASLPPGCRFYPSEEQLLCYYLANKNAGGNFHGRDLIRELDLYDCDPLQLPEIACFSHGYRGRKRHWYCYTARVLKDARRKTRMVKSGYWMRKGGVRNVLNGGGNVVLGTRTTFVFYLGNCPKNASRTNWMLHEYALVDHLKASFVVCRVFFKACRKNSVSENVMCSCAEESYSAVRHIGIQHDGCVSPDIIETQMRGACSIDGKISASPMTPASELDENQIAAASASIATFQRCAGPQDHPTGRFSGLPGGGALFVEDLASRQDLFSILEEDFIELDDLA 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0843 292 Pfam No apical meristem (NAM) protein 16 148 IPR003441 GO:0003677|GO:0006355
Lele04g0843 292 SUPERFAMILY NAC domain 12 164 IPR036093 GO:0003677|GO:0006355
Lele04g0843 292 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 14 207 - -
Lele04g0843 292 ProSiteProfiles NAC domain profile. 15 164 IPR003441 GO:0003677|GO:0006355
Lele04g0843 292 Gene3D NAC domain 24 168 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0843 Lele-ChrLele04 5155936 5158234 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0843 15 171 NAC Transcription Factor Family AT1G76420 38.788 4.30e-29 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele04g0843 NAM 2.2e-25 No_clan