Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0842 ATGTGGGAGCACGAACCCTCCCTCTCTCTTGGCTTCAAACGCTTACGCCCTCTCGCCCCCAGGCTCCACAACACTCACTCTCACTCTCTTTCCTCTTTCGATCTCAACACCTTCATCAGACCCGACAGTGGCCCCAGAAAGCTCCCTTCCCCTCACCATCACCTTCACCTTCACAAAGAGGAATCTCAGCCAGGAGGAACCAGGTGGAATCCCACTCAGGAACAGATCGGCATATTGGAGATGCTCTACAGAAGCGGAATGCGAACTCCAAACGCTGACCAGATAGAGCAGATCACTGTTCAGCTTGCCAAGTACGGCAAGATCGAAGGCAAGAATGTCTTCTACTGGTTCCAAAACCACAAAGCCCGCGAAAGACAAAAGCAGAAACGCAACCCTAATACTACTACCACCGCTTCTTCTACTCCTTCAACTTTAGAGACACGGGTATGTCGTTCACATAAAACGTTATCAGACCAAGTAGGAGAAGGAGAGGAAGATAGCCCGTTGAGGAAGAGGTGTAGGAGCTTGGCGTTTGAGTGTTTTAAATTAGGAGAAAGAAGGTTGTTACGTAGAGATCATGAGGAATATAAAACTCTGGAGCTTTTCCCTTTGTACCCGGAAGGCAGATGA 630 0.4905 MWEHEPSLSLGFKRLRPLAPRLHNTHSHSLSSFDLNTFIRPDSGPRKLPSPHHHLHLHKEESQPGGTRWNPTQEQIGILEMLYRSGMRTPNADQIEQITVQLAKYGKIEGKNVFYWFQNHKARERQKQKRNPNTTTTASSTPSTLETRVCRSHKTLSDQVGEGEEDSPLRKRCRSLAFECFKLGERRLLRRDHEEYKTLELFPLYPEGR 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0842 209 ProSiteProfiles 'Homeobox' domain profile. 62 127 IPR001356 GO:0003677
Lele04g0842 209 Gene3D - 66 131 - -
Lele04g0842 209 PANTHER WUSCHEL-RELATED HOMEOBOX 4 2 209 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Lele04g0842 209 MobiDBLite consensus disorder prediction 121 147 - -
Lele04g0842 209 MobiDBLite consensus disorder prediction 42 70 - -
Lele04g0842 209 MobiDBLite consensus disorder prediction 131 147 - -
Lele04g0842 209 SMART HOX_1 64 131 IPR001356 GO:0003677
Lele04g0842 209 SUPERFAMILY Homeodomain-like 64 131 IPR009057 -
Lele04g0842 209 CDD homeodomain 67 128 IPR001356 GO:0003677
Lele04g0842 209 MobiDBLite consensus disorder prediction 46 63 - -
Lele04g0842 209 FunFam WUSCHEL-related homeobox 4 66 133 - -
Lele04g0842 209 Pfam Homeodomain 67 126 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0842 Lele-ChrLele04 5150172 5150879 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0842 7 152 Wox Gene Family AT1G46480 59.756 5.83e-55 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lele04g0842 Homeodomain 1.3e-18 CL0123