Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0824 ATGATATCCGATTTTATGAAGGTGCTTCTCTGGTTAGTACTGGCCATTGGGTGCTTTGAAGCTGTGGGCATCTTTCTGGTTTGGTGTCTAGTGAGGAGGAAAAGAAAGTCGGGTACAGATCAACACGACTACCACCTTACTGCTACTGGATTTAGAAACTTTAGCTATTCTGAGTTGAAAGAGGCAACAAAAGGGTTCAGTGAAGAGATTGGCAGGGGTGCTGGAGGAGTCGTATACAAGGGTGTGCTAAAGGATCAACGAGTTGCAGCAATCAAGAGACTCAGAAGCCAGCCAAGGAGAAAAAATGATACCAACAACTCAGGCTTCTCGAGGATTAGAGGAACAAGAGGCTACATGGCACCTGAGTGGGTGTTTAATTTACCCATCACGTCGAAGGTGGATGTTTATAGCTATGGGATTGTCCTGTTGGAGATGGTAACGGGAAAAAGCCTAGGGGGCTCCCACATGGTAGATGGGGAGGAGTCACAACATCACGGGAGGCTGGTGACATGGGCGAGGGAGAAGAAGAATAGAGGAAATGGAACGGCATCGTGGGTGGAACAAATCATTGATCCAACGATTGAGGGGAATTACGAGAATGGGAAGATGGAGATTTTGGCTAGGCTGGCTCTGGACTGTGTTGAGGAAGAGAGAGATGCAAGACCCACGATGAGTCAAGTGGTGGAGATGCTTCAGGGCAATGAAACTGGTTCTCATCAGTGA 723 0.4772 MISDFMKVLLWLVLAIGCFEAVGIFLVWCLVRRKRKSGTDQHDYHLTATGFRNFSYSELKEATKGFSEEIGRGAGGVVYKGVLKDQRVAAIKRLRSQPRRKNDTNNSGFSRIRGTRGYMAPEWVFNLPITSKVDVYSYGIVLLEMVTGKSLGGSHMVDGEESQHHGRLVTWAREKKNRGNGTASWVEQIIDPTIEGNYENGKMEILARLALDCVEEERDARPTMSQVVEMLQGNETGSHQ 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0824 240 SMART serkin_6 64 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g0824 240 SUPERFAMILY Protein kinase-like (PK-like) 40 98 IPR011009 -
Lele04g0824 240 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Lele04g0824 240 ProSiteProfiles Protein kinase domain profile. 1 240 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g0824 240 ProSitePatterns Protein kinases ATP-binding region signature. 70 92 IPR017441 GO:0005524
Lele04g0824 240 PANTHER OS07G0415500 PROTEIN 8 96 - -
Lele04g0824 240 Gene3D Transferase(Phosphotransferase) domain 1 89 240 - -
Lele04g0824 240 SUPERFAMILY Protein kinase-like (PK-like) 107 232 IPR011009 -
Lele04g0824 240 Pfam Protein kinase domain 108 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0824 Lele-ChrLele04 5052403 5056039 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0824 7 92 Receptor kinase-like Gene Family AT3G58690 28.846 1.13e-06 47.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele04g0824 Pkinase 7e-13 CL0016