Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0819 ATGTCCGATCAAGAGAATTGCGGGAGGGCCCCTCGAGCAGCCAAGAAGAGGGCCGCCGCCGCCATTGCTGAACTGGATGTTTCCACCAAGAAGCGCGTGGTATTGAGAGAGCTCACCAACTTGTCAAATGCTGTCATACCAGAGAAACCATGCCCTGGGGAAGAGATTCAGAGGGAGAAAAGTAGCAGAGTCAAGAGAAAACTCAGAAAAGTGCTACCCACAACCGCGACGCCGCCGTCCAATCTCAATGGTGCTGATGACCCTCAATTGGCTGTGCCTTATGTTTCTGATATTTTCGAGTATCTCCGAAAATTGGAGGCGAATCCCAGAAGAAGACCGTTACCTGATTACATAAAAAAAGTTCAGAGGGATTTTGATACTAATATGAGAGGCATTCTGGTAGATTGGTTGGTGGAAGTTGCAGAGGAATACAAGCTTGTTTCAGACACTCTTTATCTCACCGTTTCCTACATCGACAAATATCTATCTTCAAACGCTCTCAGTAGGGACAAGCTGCAGTTGCTGGGTGTTTCTTCGATGCTAATTGCCTCAAAATATGAGGAGATTAAGCCTCATGAGGTGGAAGAGTTTTGTGACATTACGGACAACACATACACCAAGGAAGAGGTTGTGACCATGGAGGCTGAAATACTTAAGTCATTGAAATATGAAATGGGATATCCTACAGTAAAGACATTTCTAAGAAGGTTCAGTAGAGTTGCTCTGGAGAATTATGAGGCTTCTGAACTCCAGTTTGAATTCCTTACTTACTATCTCGCGGAGCTCAGTTTGTTGGATTATAGTTGTGTAAAGTCCTTGCCCTCTTTGGTGGCCGCATCTGTTGTATTTCTTGCTAGATTCATGTTAAGCCCAAAGACTCATCCTTGGAATTCCACGCTTCATCAACACTCAGGGTATAAATCATCTGACTTGAAGGACTGTGTATTGGTCATTCATGACTTGTATCTCAGTCGGCGAGGCGGGTCTTTGCTAGCTGTAAGAGCTAAATATAAGCAGCATAAGTTCAAATGTGTTGCAACAACGCCTTCTCCTCCAGAGATACCTCTTTCTTATTTTGAAGTTACAGAGACAGATCATTAG 1101 0.4414 MSDQENCGRAPRAAKKRAAAAIAELDVSTKKRVVLRELTNLSNAVIPEKPCPGEEIQREKSSRVKRKLRKVLPTTATPPSNLNGADDPQLAVPYVSDIFEYLRKLEANPRRRPLPDYIKKVQRDFDTNMRGILVDWLVEVAEEYKLVSDTLYLTVSYIDKYLSSNALSRDKLQLLGVSSMLIASKYEEIKPHEVEEFCDITDNTYTKEEVVTMEAEILKSLKYEMGYPTVKTFLRRFSRVALENYEASELQFEFLTYYLAELSLLDYSCVKSLPSLVAASVVFLARFMLSPKTHPWNSTLHQHSGYKSSDLKDCVLVIHDLYLSRRGGSLLAVRAKYKQHKFKCVATTPSPPEIPLSYFEVTETDH 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0819 366 Gene3D - 97 347 - -
Lele04g0819 366 ProSitePatterns Cyclins signature. 130 161 IPR006671 -
Lele04g0819 366 PANTHER CYCLINS 63 344 IPR039361 -
Lele04g0819 366 SUPERFAMILY Cyclin-like 227 353 IPR036915 -
Lele04g0819 366 CDD CYCLIN 226 319 IPR013763 -
Lele04g0819 366 SMART cyclin_7 232 320 IPR013763 -
Lele04g0819 366 SMART cyclin_7 135 219 IPR013763 -
Lele04g0819 366 SMART Cyclin_C_2 228 351 IPR004367 -
Lele04g0819 366 FunFam Mitotic cyclin 6 113 213 - -
Lele04g0819 366 Pfam Cyclin, N-terminal domain 97 225 IPR006671 -
Lele04g0819 366 Gene3D - 111 226 - -
Lele04g0819 366 CDD CYCLIN 129 218 IPR013763 -
Lele04g0819 366 Pfam Cyclin, C-terminal domain 228 350 IPR004367 -
Lele04g0819 366 FunFam Cyclin A1 215 347 - -
Lele04g0819 366 SUPERFAMILY Cyclin-like 86 225 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0819 Lele-ChrLele04 5020972 5023218 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0819 1 360 Core Cell Cycle Gene Families AT1G47230 58.356 1.75e-149 425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0826 01 4777515 4780059 Lele04g0819 04 5020972 5023218 hybridization
Lele02g0800 02 4881591 4883984 Lele04g0819 04 5020972 5023218 hybridization