Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0818 ATGGAGACTCGCGCCGCAAAGAGAAGAGCAGAGGCCGCCACCTTAGCCCAGAACCGAACACCCAAAAGGAAGCGTGTGGTCTTGGGGGAACTTCCCAATGTATCCAACCTTATTGATCCTGTGACTTCGAATCCGGAGCTGGAGCCACAGAAACCAAAATGTCGAAGGAATACGAGGGCCAAGAAAGCCCCGACGACCAAGAGTAGCTTCTCTTCGGGGGATCCCAAGTCGGATTACGCGAAGGCAGTTACTACTGATGCTAAATCAGGCACCGATGCGAATTTGGGTGATTTGGAAAATAGCGAGGCTTATGTTTCGGACATCTATAAGTATCTTCGCAAGATGGAGGTGGAGCCAAAGAGAAGACCAATGCCTGATTACCTAGAGAAGGTTCAGAAAGATGTTACCGCCAACATGAGGGGAATACTGGTTGATTGGTTAGTAGAAGTTGCAGAGGAGTACAAGCTTCTCTCTGACACTCTTTACCTCTCTGTTTCGTACATTGATCGCTTCCTCTCTACCAACCTAGTCACAAGGCAGAAGCTTCAGTTGCTGGGTGTTTCATCTATGCTCATCGCATCGAAGTATGAAGAAATTAGCCCTCCTCATGTGGAAGAGTTTTGCTACATCACCGATAATACATACAGGAAGGCTGAGGTTGTAGAAATGGAGGCTGCTATACTAAAATCTCTAAATTTTGAAATGGGTAGCCCCACGGTGAAGATGAGGTTTACTGGTGTTACTTCCGAAAACCAGAAAAGCCCAAATCTGCAGTTTGAGTTCCTTTGCTGCTATCTTGCCGAGTTAAGTTTGTTGGATTACAATTGTATCAAATTTTTACCTTCTCTGGCGGCTGCTTCAGTCATATTTCTGGCCAACTTTACCATCCGGCCTAAGGTGCATCCCTGGAAGGGGAGGATCTTTGCAAGCTATGCGGGAGAAATACAAACAGCACAAGTTGGGAGTTGTCTAACGAAACTGACCTATAACGCCATCAAATTGATAGAAGTTGATAACTTTGCAAGGAAGGGCATGGATCTCCGTTTGTGCGATACAGGAGGGGGCTTTATTGTTAATCGTGTACGGTGGTCAAGAATTGGTCTCCCCAATATAGGATGCTGA 1122 0.4626 METRAAKRRAEAATLAQNRTPKRKRVVLGELPNVSNLIDPVTSNPELEPQKPKCRRNTRAKKAPTTKSSFSSGDPKSDYAKAVTTDAKSGTDANLGDLENSEAYVSDIYKYLRKMEVEPKRRPMPDYLEKVQKDVTANMRGILVDWLVEVAEEYKLLSDTLYLSVSYIDRFLSTNLVTRQKLQLLGVSSMLIASKYEEISPPHVEEFCYITDNTYRKAEVVEMEAAILKSLNFEMGSPTVKMRFTGVTSENQKSPNLQFEFLCCYLAELSLLDYNCIKFLPSLAAASVIFLANFTIRPKVHPWKGRIFASYAGEIQTAQVGSCLTKLTYNAIKLIEVDNFARKGMDLRLCDTGGGFIVNRVRWSRIGLPNIGC 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0818 373 SUPERFAMILY Cyclin-like 101 235 IPR036915 -
Lele04g0818 373 Pfam Cyclin, N-terminal domain 107 235 IPR006671 -
Lele04g0818 373 CDD CYCLIN 260 327 IPR013763 -
Lele04g0818 373 FunFam G2/mitotic-specific cyclin 123 236 - -
Lele04g0818 373 CDD CYCLIN 139 228 IPR013763 -
Lele04g0818 373 PANTHER CYCLINS 74 325 IPR039361 -
Lele04g0818 373 SUPERFAMILY Cyclin-like 254 305 IPR036915 -
Lele04g0818 373 Gene3D - 107 329 - -
Lele04g0818 373 SMART cyclin_7 145 229 IPR013763 -
Lele04g0818 373 SMART cyclin_7 242 329 IPR013763 -
Lele04g0818 373 ProSitePatterns Cyclins signature. 140 171 IPR006671 -
Lele04g0818 373 MobiDBLite consensus disorder prediction 1 93 - -
Lele04g0818 373 Pfam Cyclin, C-terminal domain 251 327 IPR004367 -
Lele04g0818 373 PIRSF Cyclin_A_B_D_E 1 339 IPR039361 -
Lele04g0818 373 Gene3D - 123 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0818 Lele-ChrLele04 5012795 5015022 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0818 5 303 Core Cell Cycle Gene Families AT1G47210 56.954 1.57e-111 328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0818 04 5012795 5015022 Lele04g0818 04 5012795 5015022 ECH
Lele01g0825 01 4772397 4774330 Lele04g0818 04 5012795 5015022 hybridization
Lele02g0799 02 4875098 4877186 Lele04g0818 04 5012795 5015022 hybridization