Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0804 ATGGTCATTTTTTCGAAGTCGTGGTCTTTTAGAACTCTTCTTCTTCCTCTTGAACAGCCCTTTCCAGTGAATATTGACATCATGAAGGTTCCTGGCTTTTGGGTTCTTCTCGCGGTGGTTGGGACTATTTTGATATGCTTTAACTTCTCGAGCTCCATTGCTGACTCCTGTTTTCCTGATTTGGACTCCACCAACTGTGGTGATAGCTCAATAATTACAGTAAGCAGGAAACTGAAGGAAAACAGAATTGGAATGAGAAGCAACAAAAAGTATGGTATAGGTGATATAACTCTGGATGATTATCAACCCATTGATCCAGTACCAAGTTCAAAGGCCTCTGTAAAACCTGGACCTATTGAGCATGGCACTCCTCTAATCCCATTCATCCCAAAACCTTCGCCTCCTGTTCCTCCTATCTCTGAAGAAAATGAGTCAAAGGCGTTCAATGTCGTTCTGACTTTACTGAGCCGAAAACGGGATATGGATGTGTCTCTTCGTTTCACGGCAATAATAAAACATGAAGCGAAGGCACAGAAAGCGAAGGCACAGAAAGTGAAGTATCACAGATTTGTGCTGTGTTGCTTTAACTGGGGATGGAAGGAGTGGATGAAAGATGTTTATGCCATAAAACTGTTTCTTCTTGCCACTCGCTACGCCTATTTACTTTACAGTTCCGAAAGACGACAACATTCCTCAACCACCAGATCACATAGACGAATGCTGCCTTATATTGAAGCAGTAAAAGCAACATTTTCCACGACCACCATAAACCCCAAAACCACAAGCAAAGGAGGTCCTGCTCCTCCGTATCACCACCCAACGAGGACTCCTCTCTTACCCTCTGAATCCGACAATGCACTCTCTCCTCGCAGGCCCAAACTTCATCAAGTTACGTCTCGTTACATGTCTTCCTCCTCCTCCTCCTCGTCTACTTCCTCGTCAAGTTTGAGACGATGTCAATCGCCCCTTCAGTCCACCACCATGAATTCAGCATCTATGGGGAAGCCAACGCAGTCTCCATCACTGGCCAAGCGATCACTCTCAGTACACCGGAGTCGACCGTCCAATCCTCGGCTTAAACCTTCGTATGTGGGAGGTGGAAATATTGGTGGCACTGGTTCGCCGACGGCTCAGGAGATGCTTTTCACCTCAACCAGGAGTTTATCGGTTTCGTTTCAGGGTGAGTCATTCTCGATCCAGGTTAGCAAGGAGAAACCAGCACCTTCGCCAAATCTAAGGAAAAGTACGCCGGAGAGGAGGAAGGCCACAACTCCCGGCAGAGGAAGAAGCGGAAGCTCAGGCCAGACTGAAAATTCAAGGTCAACGGATCAGCAGAGATGGCCAGGAACAATGCGACCCTTGAATTGTACGACTAAAAGTGTGGATTGCACGGACGACACGAAAAAATTGGGAGGATCCAGGAACGTCGTTAAGTCACTGCAAAATTTGATGGTACATGTTCAGGATTCCACTTATGAGACGATGAATTCTGAAGAGGGCAACGGAGAAGACAAGAAGATTGCTGAGGCCGTTCTTGAAAGGAACAAAGTTGGTGGATCTGAGTTCATTCCTTCTGATAATGAAAGTGTGTCTTCTGGTAGTTCTTCCGGCGGTGGGGAACAAGGGCAACGAGGTTCCCGTGGAACTGTGGTGCCAGCAAGTTTCTGGCAAGAAGCTAACAACCGGTTGCGGCAACAGATGGGCCCTGCATCCCCACCGTCAAGGAATTCTGGAAATAAAGCAATTTTTTCGCCTAAGCATCTCAATCCAAAAGATTTAAGTGTTGATAGTCCCATAACATCTCCCCGAAAAATTATTAATAGCAGGGGGCAAGAATCTCCCATTCGTGCGGCGGTTCGTTCTGCCTCTCCAAATAAGCTCCCCACACCATCCATACGGTCCCCTTGGAGAGGAATCAGCCCATCTCGAGTAAGAAATGGAGTGGCAGGTGGCCTGAACGATAGGCAGGGCAATGTGCCTTCTATTTTAAGTTTTGTTGTTGATGTCCGAAGAGGAAAGATAGGGGAGAGCCGAATCGTTGACGCACATTTACTGAGACTCCTCTATAACAAACTCTTGCAATGGCGATTTGTAAATGCCAGGGCAGATGCCACCCTCTCTTTTCAGAGATTGAATGCAGAGAAAAGCCTCTATAATGCGTGGGTAGCTACCTCTGAGCTACGAGAATCTGTTAGAGCCAAAAGAACAGAGTTAATACTGCTTAAGCAACATATCAAGCTAATTTCCATCCTCAAGGAACAGATAACGTATTTGGAAGATTGGGCTCTTTTGGATCGGGGATACTCTAGTTCACTCTCAGGGGCTATTGAGGCCTTAAAGGCTAGCACTCTCCGCCTTCCCGTTGTTGGCGGGGCAAAGGCGGATGTGCTGAATGTGAAGGATGCCATTTGTTCCGCAATGGATGTGATGCAGGCAATGGCGTCGTCTATATGTTTGTTGTCACCAAAGGTTGGACACGTAAACTCGCTATTGTTTGAAGCTGCTAATTTGAGTTCAAAAGAGCTTGCTTTGCTAGACGAGTGCAAAAATCTTTTGTCAATCATTGCAGCTCTGCAGGTTTCAGAGCGGAGTCTGAAAACACATATTTTACAGTTGAAATGCTCGCCTTACCCCGAAGCCAAACAATGA 2649 0.4651 MVIFSKSWSFRTLLLPLEQPFPVNIDIMKVPGFWVLLAVVGTILICFNFSSSIADSCFPDLDSTNCGDSSIITVSRKLKENRIGMRSNKKYGIGDITLDDYQPIDPVPSSKASVKPGPIEHGTPLIPFIPKPSPPVPPISEENESKAFNVVLTLLSRKRDMDVSLRFTAIIKHEAKAQKAKAQKVKYHRFVLCCFNWGWKEWMKDVYAIKLFLLATRYAYLLYSSERRQHSSTTRSHRRMLPYIEAVKATFSTTTINPKTTSKGGPAPPYHHPTRTPLLPSESDNALSPRRPKLHQVTSRYMSSSSSSSSTSSSSLRRCQSPLQSTTMNSASMGKPTQSPSLAKRSLSVHRSRPSNPRLKPSYVGGGNIGGTGSPTAQEMLFTSTRSLSVSFQGESFSIQVSKEKPAPSPNLRKSTPERRKATTPGRGRSGSSGQTENSRSTDQQRWPGTMRPLNCTTKSVDCTDDTKKLGGSRNVVKSLQNLMVHVQDSTYETMNSEEGNGEDKKIAEAVLERNKVGGSEFIPSDNESVSSGSSSGGGEQGQRGSRGTVVPASFWQEANNRLRQQMGPASPPSRNSGNKAIFSPKHLNPKDLSVDSPITSPRKIINSRGQESPIRAAVRSASPNKLPTPSIRSPWRGISPSRVRNGVAGGLNDRQGNVPSILSFVVDVRRGKIGESRIVDAHLLRLLYNKLLQWRFVNARADATLSFQRLNAEKSLYNAWVATSELRESVRAKRTELILLKQHIKLISILKEQITYLEDWALLDRGYSSSLSGAIEALKASTLRLPVVGGAKADVLNVKDAICSAMDVMQAMASSICLLSPKVGHVNSLLFEAANLSSKELALLDECKNLLSIIAALQVSERSLKTHILQLKCSPYPEAKQ 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0804 882 PANTHER AUGMIN FAMILY MEMBER 280 873 - -
Lele04g0804 882 MobiDBLite consensus disorder prediction 254 377 - -
Lele04g0804 882 MobiDBLite consensus disorder prediction 426 461 - -
Lele04g0804 882 Pfam QWRF family 529 846 IPR007573 -
Lele04g0804 882 MobiDBLite consensus disorder prediction 518 548 - -
Lele04g0804 882 MobiDBLite consensus disorder prediction 565 583 - -
Lele04g0804 882 MobiDBLite consensus disorder prediction 594 608 - -
Lele04g0804 882 MobiDBLite consensus disorder prediction 522 548 - -
Lele04g0804 882 MobiDBLite consensus disorder prediction 399 471 - -
Lele04g0804 882 MobiDBLite consensus disorder prediction 565 640 - -
Lele04g0804 882 MobiDBLite consensus disorder prediction 297 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0804 Lele-ChrLele04 4941508 4951984 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0804 04 4941508 4951984 Lele25g0818 25 5264909 5267669 CCT
Lele04g0804 04 4941508 4951984 Lele26g0830 26 5326974 5330059 CCT
Lele04g0804 04 4941508 4951984 Lele27g1260 27 19419739 19423376 CCT
Lele04g0804 04 4941508 4951984 Lele28g0815 28 5238473 5241785 CCT
Lele04g0804 04 4941508 4951984 Lele04g0804 04 4941508 4951984 ECH
Lele01g0815 01 4720555 4731244 Lele04g0804 04 4941508 4951984 hybridization
Lele02g0786 02 4807814 4811707 Lele04g0804 04 4941508 4951984 hybridization