Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0792 ATGAAACTCGGCTCTGTGAATGGTCACCCTTATTCTCATTATGAGCATGAGATAAAGCCTTCAACAACAACCACACAACAGCTTCGTTGTAATTATCACTTGAATGAGACTCTTCTTCTCCTTGCTGTCCTCCTTCTCCATATCTCGTCTCAGTCTGCAACATGTGGCTCGATCGTCAGGTTTCTTCCTGGATTCCAGGGACCACTCCCTTTTGTTCTAGAGACAGGGTACGTAGGAGTTGGTGAAACAGAGGAAGTGCAGTTGTTTTACTACTTTATCGAGTCAGAGAACAATCCCAGAGATGATCCTCTCATGCTCTGGCTAACTGGAGGACCTGGTTGCTCTGCACTTTCGGGTCTCGTCTTTGAAATCGGTCCACTTGAATTTTCAAACCAGGAATACAATGGGAGCGTGCCTAATCTGGTGTTGAGACCCAGTTCTTGGACAAAGGTAAGTAGCATCATATTCGTAGATTTGCCCGCAGGTACGGGTTTCTCTTACTCCAGAACACTCCGGCAACAGCAAGGTGACTGGAAAGCAATTCACCATGCCCATCAGTTTCTCAGGAAGTGGCTGGTTGATCATCCGGAGTTTCAGTCCAATAAAGTGTACATCGGCGGTGACTCCTACTCCGGCGTCCCTCTCCCAGTAATTGTTCAAGAGATATCAAATGCAAATGAAGCAGGTATCCAGCCCCGGATAAATCTTCAGGGATACCTGCTGGGTAATCCGGTGACAGCTCCATCGAAAGCCAATTATGGGGTTCCATTCGCTCACGGAATGGGATTAATTTCTGATGAACTTTATGAGTCACTCCAAACAAATTGCAGAGGAGAGTATCGCTCCATAGACCCCAAAAATGTAAAATGTAGCAGAGATATGCAGTCCTTCAGAAAGTGTACTTCAGGACTCAACGTGGCCCATATTCTGGAACCTTTGTGTGAGTTCTCATTGCGAAAGCCAATAGAAATATCTTGGAGAAGATCTTTCACTTACAAGCCCAGGGCGGTTCTGGAATCTCATCTCTCAGCGCCATCCTTAAGCTGCCGGACTTATGCTTATTTCCTGTCTGGTAACTGGGCCAACCATCCCGATGTTCGCAAGGCACTTGGTATCCGACAGGGAAGTATAGGGAGATGGCATCGTTGTGACTATGGAATGAATTACAAGTTCGAGATCCCTGGATCCTTGGAGTATCATATGAATCTTAGCAGAAAAGGCTATCGTTCATTGATATACAGTGGGGATCATGACATGATGGTTCCTTTCCTGGAAACTCAAGCGTGGATAAGATCTTTGAATTACTCCATCGTCGATGACTGGAGACCCTGGTATATTAATGCCCAGGTTGCAGGATACACGAGGGCTTACTCCAACCAAATGACATTTGCAACTGTGAAGGGTGGAGGACATACGGCTCCAGAATATAAGCATGAAGAATGTTTTGGAATGTTTAGTCGATGGATATCTAACATACCTTTGTAG 1485 0.4566 MKLGSVNGHPYSHYEHEIKPSTTTTQQLRCNYHLNETLLLLAVLLLHISSQSATCGSIVRFLPGFQGPLPFVLETGYVGVGETEEVQLFYYFIESENNPRDDPLMLWLTGGPGCSALSGLVFEIGPLEFSNQEYNGSVPNLVLRPSSWTKVSSIIFVDLPAGTGFSYSRTLRQQQGDWKAIHHAHQFLRKWLVDHPEFQSNKVYIGGDSYSGVPLPVIVQEISNANEAGIQPRINLQGYLLGNPVTAPSKANYGVPFAHGMGLISDELYESLQTNCRGEYRSIDPKNVKCSRDMQSFRKCTSGLNVAHILEPLCEFSLRKPIEISWRRSFTYKPRAVLESHLSAPSLSCRTYAYFLSGNWANHPDVRKALGIRQGSIGRWHRCDYGMNYKFEIPGSLEYHMNLSRKGYRSLIYSGDHDMMVPFLETQAWIRSLNYSIVDDWRPWYINAQVAGYTRAYSNQMTFATVKGGGHTAPEYKHEECFGMFSRWISNIPL 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0792 494 Pfam Serine carboxypeptidase 63 491 IPR001563 GO:0004185|GO:0006508
Lele04g0792 494 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 58 478 IPR001563 GO:0004185|GO:0006508
Lele04g0792 494 FunFam Serine carboxypeptidase-like 11 53 494 - -
Lele04g0792 494 Gene3D - 350 493 - -
Lele04g0792 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 191 216 IPR001563 GO:0004185|GO:0006508
Lele04g0792 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 157 167 IPR001563 GO:0004185|GO:0006508
Lele04g0792 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 461 474 IPR001563 GO:0004185|GO:0006508
Lele04g0792 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 144 156 IPR001563 GO:0004185|GO:0006508
Lele04g0792 494 SUPERFAMILY alpha/beta-Hydrolases 59 493 IPR029058 -
Lele04g0792 494 FunFam Carboxypeptidase 396 491 - -
Lele04g0792 494 Gene3D alpha/beta hydrolase 54 321 IPR029058 -
Lele04g0792 494 FunFam Carboxypeptidase 348 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0792 Lele-ChrLele04 4859676 4863646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0792 53 82 Calmodulin-binding Proteins AT2G22960 70.000 2.44e-08 52.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0792 04 4859676 4863646 Lele04g0792 04 4859676 4863646 ECH