LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele04g0787	ATGCTCTTCCGCGAAGAAGAAGGAGCGGTCCAATTCCCATGTCCAATTCTCACGGCTGGGGATATAGAGGAGTTGTTGTCCCTCATCCAATCTGGAAATGAAGAAGATCACACGACCAGCCCAAGCTCCGGCGGTTCGCAAGGGTCCAGCCGGGAAGTTTACTCGAATGACGAGAGAAAGCGCAGGAGGATGCAGTCGAACCGGGATTCAGCCCGACGGTCCCGCTGGAGAAAGAAGAGACATTTAGAGAACCTGAACAGCCAAGTGAACCGCTTCTCAATTGAAAACCAACAGCTTAAAAACCGGCTAGGTCTTACCATGCATCAACTCCTTCGAGTTTATTTAGAGAATGAACTCCTGAGAACCGAATCCGTGGCCCTCGTGGCCAGACTTTCTGATCTACATTTGATTTTAGGCTCTCATACCGCTGCTACTGCTCAGATTTAA	447	0.4989	MLFREEEGAVQFPCPILTAGDIEELLSLIQSGNEEDHTTSPSSGGSQGSSREVYSNDERKRRRMQSNRDSARRSRWRKKRHLENLNSQVNRFSIENQQLKNRLGLTMHQLLRVYLENELLRTESVALVARLSDLHLILGSHTAATAQI	148

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele04g0787	148	Coils	Coil	82	102	-	-
	Lele04g0787	148	CDD	bZIP_plant_GBF1	60	110	IPR045314	GO:0003700\|GO:0006355
	Lele04g0787	148	MobiDBLite	consensus disorder prediction	32	80	-	-
	Lele04g0787	148	MobiDBLite	consensus disorder prediction	53	71	-	-
	Lele04g0787	148	SMART	brlzneu	55	119	IPR004827	GO:0003700\|GO:0006355
	Lele04g0787	148	MobiDBLite	consensus disorder prediction	32	52	-	-
	Lele04g0787	148	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	57	103	IPR004827	GO:0003700\|GO:0006355
	Lele04g0787	148	SUPERFAMILY	Leucine zipper domain	59	110	IPR046347	GO:0003700\|GO:0006355
	Lele04g0787	148	Pfam	bZIP transcription factor	59	104	IPR004827	GO:0003700\|GO:0006355
	Lele04g0787	148	ProSitePatterns	Basic-leucine zipper (bZIP) domain signature.	62	77	IPR004827	GO:0003700\|GO:0006355
	Lele04g0787	148	Gene3D	-	57	110	-	-
	Lele04g0787	148	FunFam	BZIP transcription factor	57	108	-	-
	Lele04g0787	148	PANTHER	BZIP TRANSCRIPTION FACTOR 44	38	139	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele04g0787	Lele-ChrLele04	4823483	4824750	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele04g0787	57	134	bZIP Transcription Factor Family	AT4G37730	56.410	2.59e-20	82.8

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Lele04g0787		bZIP_1	9e-10	CL0018