Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0785 ATGGGGGGTCATGAAAACACCATGGGGTTTCAACACAGGAACGAAAGTATTCTGAGCCGTACAGTATCTGGTTTGGGCACCACCAATGTTCCAGATTTAAGCAATCCTTTTTTTGGTTCTTCTGCTTGGGATCCACTTTTTTCATTGAGTCAGACTCATCAAAGCTTTGGAGCCTCATCATTGGTTTCTCATTGTGACTTTGCTAACTCTTCTTACCCAAGTTTCTTGGAAAATCAGGGAATGAGCAGCTCCTCTCACCTTGTTCACTACATATCTGACTCCAATTTTGCTGATGTGATCCCAAAGATCGCTTCCTGTGGAAATGGTGATATAGCTAATGCAGGATATGCTTCAAGTTATAATCCAAATAAGGAAGAACAATTGCAGGGTGAGCATTCCACTCCTGAAGAAGAGGGACCCACATCTTCACCTATTGGAAATAGAAGAAAACGAGGGCCTGATCATAATCCTGCATTCCACCCAAGTAAGAGCGCTGAAGGGGAAGCACTTAAGGGTTCATCGGGGAAAAGCTCAGATGGCGTGAAAGAACAAGATGATAAGAAGCCAAAATTTGATCAAAATACATGTGCAGATTTGCTTGGTAAGCAATCGGTGAAGCAAGCTAAAGACTACTCTCAGAGTGGAGAAGCTCCCAAAGATAATAATTTCATCCATGTGAGAGCTCGAAGGGGTCAAGCTACAAATAGTCATAGCCTTGCAGAAAGGATAAGAAGAGAAAAGATAAGTGAGAGAATGAAGTTACTTCAAGAACTTGTTCCCGGATGCAACAAGATAACTGGCAAAGCAGTAATGCTTGATGAGATTATTAACTATGTGCAATCACTGCAACAACAGGTTGAGTTTTTGTCCATGAAACTTGCCACCGTGAACCCTGAACTGAATGTGGATGTAGAGCGGATCCTATCCAAAGATATTCTGCACTCGCGCATCGGACATGGAGCTATTGGTGGATACGGAGGTGGTATGATCAACTCAAACCACCTATTTTCCGGTGGAAGTTTTCAGGGGACCCTGGGAAGCATACCAAGCACATCAAATATCCCTCCTTTGCCTCAGAGAGTTATGGATGATGAACTCCAGAGCATATATGGAATGCGATACGATTCTAATTCAGCTCTTCAAAATTTGGGACCACAACCAGGGCGGCAGGAATGA 1176 0.4328 MGGHENTMGFQHRNESILSRTVSGLGTTNVPDLSNPFFGSSAWDPLFSLSQTHQSFGASSLVSHCDFANSSYPSFLENQGMSSSSHLVHYISDSNFADVIPKIASCGNGDIANAGYASSYNPNKEEQLQGEHSTPEEEGPTSSPIGNRRKRGPDHNPAFHPSKSAEGEALKGSSGKSSDGVKEQDDKKPKFDQNTCADLLGKQSVKQAKDYSQSGEAPKDNNFIHVRARRGQATNSHSLAERIRREKISERMKLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNVDVERILSKDILHSRIGHGAIGGYGGGMINSNHLFSGGSFQGTLGSIPSTSNIPPLPQRVMDDELQSIYGMRYDSNSALQNLGPQPGRQE 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0785 391 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 128 338 IPR024097 GO:0006355
Lele04g0785 391 MobiDBLite consensus disorder prediction 117 141 - -
Lele04g0785 391 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 230 299 IPR036638 GO:0046983
Lele04g0785 391 FunFam Basic helix-loop-helix transcription factor 229 301 - -
Lele04g0785 391 Pfam Helix-loop-helix DNA-binding domain 235 283 IPR011598 GO:0046983
Lele04g0785 391 Gene3D - 229 304 IPR036638 GO:0046983
Lele04g0785 391 SMART finulus 238 288 IPR011598 GO:0046983
Lele04g0785 391 CDD bHLH_AtBPE_like 222 307 - -
Lele04g0785 391 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 232 282 IPR011598 GO:0046983
Lele04g0785 391 MobiDBLite consensus disorder prediction 178 193 - -
Lele04g0785 391 MobiDBLite consensus disorder prediction 117 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0785 Lele-ChrLele04 4793929 4796023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0785 1 385 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 42.857 1.05e-75 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele04g0785 HLH 7.8e-07 No_clan