Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0779 ATGGGGAGAGCTCCTTGCTGCGACAAAGCCAACGTGAAGAGAGGCCCTTGGTCCCCAGAAGAAGATGCCAAGCTCAAGTCATATATCGAACAACACGGCACCGGCGGTAACTGGATCGCTTTGCCCCAAAAGATCGGTCTAAAGAGATGCGGCAAGAGTTGCCGTCTAAGGTGGCTGAACTACCTTCGCCCCAATATTAAGCATGGGGGTTTCTCCGAAGAAGAAGACAACATCATATGCAGCCTCTACGTTAGCATTGGAAGCAGGTGGTCGGTGATTGCTGCTCAATTGCCAGGAAGAACAGATAACGATATAAAGAACTACTGGAACACGAGGTTGAAGAAGAAGCTTCTGGGAAAGCACCGTAAAGAGCAACAGGCACGTGGTAGGGGCAAGAGTAAGAATAAGAGTGTTGTTGCTAATTCATGGATTATTCCCGAAAATATTAGTACTGGTCAGGTTCAGGTTCAGGTTCAGGCTCAACAACACCCATATTGGCCTCACCCCCAGATGATGCCCGTGTTACCACCCATGCCATACTCAGACGACCAAGTCCCGGGTTTCAACGACCAAGATTCCATTAGAAAATTGCTGATCAAGCTTGGAGGAAAGTTTTCTGACCAGCTTGATCAAGGGTTCAATTTTCAATTACCAGAAGCTACTCCTCCCTCCGCACAATCACCAATTTATCAAGTTTCTTCTTCTTCTGCTTCTGCAAGCGCTATGAACAATAACCAACTAGAATTCCCTCATCTCCATTACCACTCTGGACTTAGTAACTTGGTGCAAGGAAGCAGCACTTTGACTCAAGCACATGAGGAAATGTCTCTACCTTATCCCCCTAACCTAGAAGGCCTGGAATACTTGATCAATCATGATCATAAGATAGACCCTACCAGCTTGTGTGACACCAACACCCTACTGATTTCCTCCGATTATGAATGTATGCCACCGCCTCAGGAATTTGCTTTTCAGGAGTTGAGTACTGCCGGCAAAGCATTTGTGGGATTCTTCGTGAGTCAACAGCTATCTATGTTCCTCTTGGAGAAAAGAATGAAGCCATGA 1065 0.4648 MGRAPCCDKANVKRGPWSPEEDAKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDNIICSLYVSIGSRWSVIAAQLPGRTDNDIKNYWNTRLKKKLLGKHRKEQQARGRGKSKNKSVVANSWIIPENISTGQVQVQVQAQQHPYWPHPQMMPVLPPMPYSDDQVPGFNDQDSIRKLLIKLGGKFSDQLDQGFNFQLPEATPPSAQSPIYQVSSSSASASAMNNNQLEFPHLHYHSGLSNLVQGSSTLTQAHEEMSLPYPPNLEGLEYLINHDHKIDPTSLCDTNTLLISSDYECMPPPQEFAFQELSTAGKAFVGFFVSQQLSMFLLEKRMKP 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0779 354 CDD SANT 71 113 IPR001005 -
Lele04g0779 354 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Lele04g0779 354 PANTHER OS09G0431300 PROTEIN 1 249 - -
Lele04g0779 354 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Lele04g0779 354 Gene3D - 7 68 - -
Lele04g0779 354 CDD SANT 16 62 IPR001005 -
Lele04g0779 354 FunFam Transcription factor RAX3 7 68 - -
Lele04g0779 354 FunFam Transcription factor MYB36 70 140 - -
Lele04g0779 354 Gene3D - 70 141 - -
Lele04g0779 354 SMART sant 13 64 IPR001005 -
Lele04g0779 354 SMART sant 67 115 IPR001005 -
Lele04g0779 354 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Lele04g0779 354 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Lele04g0779 354 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Lele04g0779 354 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Lele04g0779 354 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0779 Lele-ChrLele04 4751375 4753376 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0779 1 208 MYB Transcription Factor Family AT3G49690 62.500 1.08e-85 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele04g0779 Myb_DNA-binding 1.9e-14 CL0123