Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0752 ATGACTCCCGATGATCGTGACCCGGAACAAAGAAGATCAAAATCAAGACAAGGACAAGAATCCGTGAATCCAAATTCTTGGTTGATGAACTTTAACCGTGATCTGGTGGCCGCATCAGTCGTGGGTGGGGTGGTTCACACCATCGTGGCTCCAATTGAGAGGGCGAAGCTTTTGTTGCAGACCCAAGAAAGTAATATGGCCATTGTAGCCAATGGGCGACGTAAATTCAAGGGCATGTTGGATTGTATGGTCCGTACTGTCAAAGAAGAAGGTTTCTTTTCTTTATGGAGAGGCAATGGGAGCAGTGTTCTTCGCTATTATCCTTCTGTCGCACTCAATTTCTCGCTCAAGGATCTATACAGAAACATATTGAGAAGTGGAAACTCAGGTAAAAATAATTTTCTATCCGGAGCATCAGCTAATTTTGTTGCTGGGGCTGGAGCTGGTTGTACAGCACTGATCGTGGTATATCCACTTGATATTGCACACACTCGCCTTGCTGGGGACATCGGACGAACAGAAAAGCGTCAATTTCAAGGCATGCATCATTTCTTGGCCACCATACTGAGAAAGGATGGGATCAGAGGGATTTACAGGGGTCTCCCTGCCTCTCTACAAGGAATGGTGGTGCACCGAGGACTTTACTTCGGAGGCTTTGACACCATAAAAGAGATGTTATCGGAAGAACCAGATGGCAAGTTAGCTTTGTGGAAACGTTGGGTGGTGGCTCAGGCAGTGTCATCATCAGCTGGGTTGATATCATACCCATTGGACACAGTTCGAAGGAGGATGATGATGCAGTCCGGCATGGAACGCCCCGTGTACAGTAACACCCTCGACTGTTGGAGGAAAATATATAGGACAGAAGGTTTCGTTTCATTTTACCGTGGGGCTGTCTCCAACACGTTTAGGAGCACCGGAGCTGCAGCCGTATTAGTCTTGTACGATGAGGTTCCCTTTGCTGTCCTAGAGTCTGATCGTTTGTTTAAGGACTTGACGTCGCGTAGTACATATGGAGGTAGGAGGTTGAAGATGGCGATGAAATCATACCCAGAGAGCACCGACTTGGACGAGCTTGGGGACGAGGTGGCCACTGACGTGGAGGGTAACGAGGGACTCCAACCCGCCGATGTAGGTTCCACCGATGAAGATGGCGGGGGCGCGATTATTATTAGGTAG 1179 0.4843 MTPDDRDPEQRRSKSRQGQESVNPNSWLMNFNRDLVAASVVGGVVHTIVAPIERAKLLLQTQESNMAIVANGRRKFKGMLDCMVRTVKEEGFFSLWRGNGSSVLRYYPSVALNFSLKDLYRNILRSGNSGKNNFLSGASANFVAGAGAGCTALIVVYPLDIAHTRLAGDIGRTEKRQFQGMHHFLATILRKDGIRGIYRGLPASLQGMVVHRGLYFGGFDTIKEMLSEEPDGKLALWKRWVVAQAVSSSAGLISYPLDTVRRRMMMQSGMERPVYSNTLDCWRKIYRTEGFVSFYRGAVSNTFRSTGAAAVLVLYDEVPFAVLESDRLFKDLTSRSTYGGRRLKMAMKSYPESTDLDELGDEVATDVEGNEGLQPADVGSTDEDGGGAIIIR 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0752 392 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 26 318 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lele04g0752 392 SUPERFAMILY Mitochondrial carrier 29 317 IPR023395 -
Lele04g0752 392 PRINTS Adenine nucleotide translocator signature 239 255 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lele04g0752 392 PRINTS Adenine nucleotide translocator signature 136 149 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lele04g0752 392 PRINTS Adenine nucleotide translocator signature 76 97 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lele04g0752 392 PRINTS Adenine nucleotide translocator signature 109 121 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lele04g0752 392 ProSiteProfiles Solute carrier (Solcar) repeat profile. 238 321 IPR018108 -
Lele04g0752 392 FunFam probable ADP,ATP carrier protein At5g56450 33 322 - -
Lele04g0752 392 Gene3D Mitochondrial carrier domain 28 319 IPR023395 -
Lele04g0752 392 ProSiteProfiles Solute carrier (Solcar) repeat profile. 136 225 IPR018108 -
Lele04g0752 392 MobiDBLite consensus disorder prediction 1 16 - -
Lele04g0752 392 MobiDBLite consensus disorder prediction 1 25 - -
Lele04g0752 392 ProSiteProfiles Solute carrier (Solcar) repeat profile. 29 123 IPR018108 -
Lele04g0752 392 PRINTS Mitochondrial carrier protein signature 98 118 IPR002067 GO:0055085
Lele04g0752 392 PRINTS Mitochondrial carrier protein signature 151 169 IPR002067 GO:0055085
Lele04g0752 392 PRINTS Mitochondrial carrier protein signature 243 265 IPR002067 GO:0055085
Lele04g0752 392 PRINTS Mitochondrial carrier protein signature 47 61 IPR002067 GO:0055085
Lele04g0752 392 PRINTS Mitochondrial carrier protein signature 34 47 IPR002067 GO:0055085
Lele04g0752 392 PRINTS Mitochondrial carrier protein signature 198 216 IPR002067 GO:0055085
Lele04g0752 392 Pfam Mitochondrial carrier protein 235 317 IPR018108 -
Lele04g0752 392 Pfam Mitochondrial carrier protein 31 125 IPR018108 -
Lele04g0752 392 Pfam Mitochondrial carrier protein 139 228 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0752 Lele-ChrLele04 4579720 4584751 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0752 31 318 Antiporters AT5G17400 38.908 1.38e-61 199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0755 01 4396114 4398608 Lele04g0752 04 4579720 4584751 hybridization
Lele02g0733 02 4420231 4422649 Lele04g0752 04 4579720 4584751 hybridization