Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0751 ATGGAGGGAGTGAGAGTGAAAGTAGAAGAAACGGTGGTATGTGGAGCTGGTTCGTCATACTCTCCTTCATCTTCCTCTTCGAGTCTCTCTCCTCGCCCCATGGAAGGGCTGCACGAGATGGGGCCTCCGCCATTTCTTATCAAGACCTTTGAAATGGTGGAAGACCCATCCACCGACCCTGTTGTTTCTTGGAGCCTTGCTCGTAACAGCTTCATTGTCTGGGACTCTCACGAGTTCTCCACCACCATTCTTCCTCGCTACTTCAAGCACAGTAACTTCTCCAGCTTCATTCGTCAGCTCAACACCTATGGATTTAGAAAAGTGGATCCTGATCGATGGGAATTTGCAAACGAAGGGTTTTTGGGTGGACAGAAGCACTTATTGAAGACAATCAAGAGAAGAAGAAATGTGTCGCAGAGTGTGCAACAAGAACGAGGGGTTGCTTGTGTTGAACTGGGGCAATACGGATTTGAAGGTGAGCTTGACAGGTTGAGAAGAGACAGGACGGTGATCATGGCCGAGATTGTGAAATTGAGACAGCAACAGCAGAATTCACGGGCACAACTGATTGCGATGGAGGAAAGATTACAGACCACGGAGAAGAAACAGCAACAGGTTCTCACTTTCCTTGCCAAAGCACTGAACAACCCAACTTTTATCCAACAGTTTGCCCAGAGAAACTCCCAAAACAGAGAATTACTTGGTGTTGACATCAGGCGAAAGAGGAGACTAACTGCTAGCGCGAGTGTGGAGAATTTGCAGGATGATTCTGTGACAGTGGCAGTGCCTAGTGAACCATTGGTGGACTACTTAACAAATGAACAAGAAGATTTGGCAACGATAGAATCTGAGATAGAGATATTTTTCTCAGCTCCTCATGATAATGAATCAAGCAGTGACAAGAAAGAGCCAGCATCAAGTTCAATTCCTACGGCAAGCGGGAGCAATCTGGTTTCAGGGAGTGATGCAATATGGGAGGACTTGCTGAACGAAGACTTAGTTCATGGAAATCCAGAGGAGGAAATTATATTTGGTGAACAGTCCCAAACCGATGCTCCAGTGGAAGATTTGGTAGCAAAGTCTGATGAGTGGGATGAAGGTTTGGAGGACTTGGTAGATCAATTGGGTTATCTTGGTTTGGCCTCTGCAACTCCATTTGTCCATTCCCTGCCTCACACGAGTGCAGGGAAAGGTGGTCGTTGCTGCAGAGGCCATCACATACTGCTGTTTTATCTGTATCCTTTATAA 1248 0.4655 MEGVRVKVEETVVCGAGSSYSPSSSSSSLSPRPMEGLHEMGPPPFLIKTFEMVEDPSTDPVVSWSLARNSFIVWDSHEFSTTILPRYFKHSNFSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRNVSQSVQQERGVACVELGQYGFEGELDRLRRDRTVIMAEIVKLRQQQQNSRAQLIAMEERLQTTEKKQQQVLTFLAKALNNPTFIQQFAQRNSQNRELLGVDIRRKRRLTASASVENLQDDSVTVAVPSEPLVDYLTNEQEDLATIESEIEIFFSAPHDNESSSDKKEPASSSIPTASGSNLVSGSDAIWEDLLNEDLVHGNPEEEIIFGEQSQTDAPVEDLVAKSDEWDEGLEDLVDQLGYLGLASATPFVHSLPHTSAGKGGRCCRGHHILLFYLYPL 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0751 415 Coils Coil 161 202 - -
Lele04g0751 415 FunFam Heat shock transcription factor 1 38 135 - -
Lele04g0751 415 ProSitePatterns HSF-type DNA-binding domain signature. 84 108 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele04g0751 415 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 31 290 IPR027725 -
Lele04g0751 415 MobiDBLite consensus disorder prediction 16 35 - -
Lele04g0751 415 Gene3D - 38 135 IPR036388 -
Lele04g0751 415 PRINTS Heat shock factor (HSF) domain signature 45 68 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele04g0751 415 PRINTS Heat shock factor (HSF) domain signature 96 108 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele04g0751 415 PRINTS Heat shock factor (HSF) domain signature 83 95 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele04g0751 415 SMART hsfneu3 41 134 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele04g0751 415 Pfam HSF-type DNA-binding 45 134 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele04g0751 415 MobiDBLite consensus disorder prediction 16 32 - -
Lele04g0751 415 MobiDBLite consensus disorder prediction 293 314 - -
Lele04g0751 415 SUPERFAMILY "Winged helix" DNA-binding domain 41 134 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0751 Lele-ChrLele04 4572999 4574747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0751 31 379 HSF AT2G26150 54.261 2.67e-129 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lele04g0751 HSF_DNA-bind 2.6e-31 CL0123