Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0744 ATGTCGACGGTATACGTGTTAGAACCGCCGACGAAAGGGAAGGTGGTGTTGAAAACAACCCATGGTCCGCTCGACATTGAGCTATGGCCCAAGGAAGCCCCCAAGGCTGTCAGGAACTTCGTGCAGCTCTGCCTTGATGGTTACTACGTTAACACGATCTTTCATCGAATCATCAAGGACTTTCTTATCCAGGGCGGCGATCCCACTGGCACCGGCACAGGGGGTGAAAGTATTTATGGGGGTGTTTTCTCTGATGAATTTCATTCACGTTTAAGATTTAAACATAGAGGTTTAGTTGCAATGGCAAATTCTGGGTCATCACACTCCAATGGGAGTCAGTTTTTCATAACTCTGGATCGTTGCGATTGGCTTGATCGGAAGCATACAATTTTTGGAAAGGTGACAGGAGATACTGTATACAATCTTTTGAGATTGGGTGAACTTGAAACTGATAAGAATGATCGGCCTCTAGATCCCCCAAAAATATTATCAATTGAGGTATTATGGAACCCATTTGATGATATTGTTCCAAGAACAACTCAACCTCAGATCCAAACTAGTACTGATACAGACAATAAAGATTCAAAGAAAAAAGCTGTAAAAAAACTGAACTTACTTTCATTTGGAGAAGAAGCCGAAGAAGAGGAAAAGGAGCTGGCATCTGTAAAACAAAAGATTAAGAGCAGTCATGATGTATTGAATGATCCTCGTCTTCTGAAGAAAGCAATTCCTAATAATGAACTGGGCTCAAAGTCAACAAGAGATGTACAGTTATCTGTAAGGGATGCATTGAGCTCAAAGAAAGAAGAGTCTCAGAAAAAATCAGAAGATAATGACTCGGCCAACATTGATGACAGTGATGATGATGATGATGAGGCGGGCTTTGATGCTAGAATGCGCAGTCAAATACTTAAAAAACGCCAAGAGTTAGGGGATTTACCACCCAAGCCAAAGTTGCTAAATGGAAGCTCAAGTCCAAAGAGCCACAATTCATCAGCAATCAGGTCCAATGCTGCAAGTGTTGATGATGATCAGCGTAGGGTGGAAAAATTGTCCGTGAAGAAAAAGGGAATAGGATCTGAAGCAAGAGCTGAACGAATGGCAAATGCAGATGTAGATTTACAGTTGTTCAATGAATCTGAGAAAAATAGACAGTTGCAGAAACAGAAGAAACGCAGAGTTCAAGGACGTGAAGATGAGGTTCTATCAAAACTAGAGAAATTTAAGAAGACTATATCGGGAAAGACCACATCCTCAACCGATGGATCTGGAGATGTAAATGAAGAGGATTTGTCGAACTGGAAAGGAAGTAGCTTAAAATTTGCACCTGCGTCCGGCAAGGATCGGATGTCGCGTAACGATGACCCTAACGACTATGTTGTGGTAGACCCGCTTTTGGAGAAAGGTAAAGAGAAGTTCAATAGGATGCAAGCCAAGCAAAAGAGACGAGAGCGAGAGTGGGCTGGCAAATCCCTTACTTGA 1482 0.4224 MSTVYVLEPPTKGKVVLKTTHGPLDIELWPKEAPKAVRNFVQLCLDGYYVNTIFHRIIKDFLIQGGDPTGTGTGGESIYGGVFSDEFHSRLRFKHRGLVAMANSGSSHSNGSQFFITLDRCDWLDRKHTIFGKVTGDTVYNLLRLGELETDKNDRPLDPPKILSIEVLWNPFDDIVPRTTQPQIQTSTDTDNKDSKKKAVKKLNLLSFGEEAEEEEKELASVKQKIKSSHDVLNDPRLLKKAIPNNELGSKSTRDVQLSVRDALSSKKEESQKKSEDNDSANIDDSDDDDDEAGFDARMRSQILKKRQELGDLPPKPKLLNGSSSPKSHNSSAIRSNAASVDDDQRRVEKLSVKKKGIGSEARAERMANADVDLQLFNESEKNRQLQKQKKRRVQGREDEVLSKLEKFKKTISGKTTSSTDGSGDVNEEDLSNWKGSSLKFAPASGKDRMSRNDDPNDYVVVDPLLEKGKEKFNRMQAKQKRREREWAGKSLT 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0744 493 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 22 167 IPR002130 GO:0000413|GO:0003755
Lele04g0744 493 MobiDBLite consensus disorder prediction 321 339 - -
Lele04g0744 493 Gene3D - 2 182 IPR029000 -
Lele04g0744 493 MobiDBLite consensus disorder prediction 470 493 - -
Lele04g0744 493 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 11 217 IPR044666 -
Lele04g0744 493 FunFam Peptidyl-prolyl cis-trans isomerase CWC27 homolog 1 179 - -
Lele04g0744 493 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 49 66 IPR020892 GO:0003755|GO:0006457
Lele04g0744 493 Coils Coil 205 232 - -
Lele04g0744 493 MobiDBLite consensus disorder prediction 412 434 - -
Lele04g0744 493 MobiDBLite consensus disorder prediction 293 313 - -
Lele04g0744 493 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 28 43 IPR002130 GO:0000413|GO:0003755
Lele04g0744 493 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 125 IPR002130 GO:0000413|GO:0003755
Lele04g0744 493 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 126 141 IPR002130 GO:0000413|GO:0003755
Lele04g0744 493 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 54 66 IPR002130 GO:0000413|GO:0003755
Lele04g0744 493 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 15 167 IPR002130 GO:0000413|GO:0003755
Lele04g0744 493 MobiDBLite consensus disorder prediction 262 280 - -
Lele04g0744 493 MobiDBLite consensus disorder prediction 392 411 - -
Lele04g0744 493 CDD cyclophilin_CeCYP16-like 8 179 - -
Lele04g0744 493 MobiDBLite consensus disorder prediction 262 458 - -
Lele04g0744 493 SUPERFAMILY Cyclophilin-like 14 180 IPR029000 -
Lele04g0744 493 MobiDBLite consensus disorder prediction 340 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0744 Lele-ChrLele04 4528214 4531895 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0744 9 172 U-box Gene Family AT5G67530 50.000 7.75e-45 164