Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0741 ATGGAGGATCTCGAGGAGGAAGAGAAAATAGAAGAGGAGGTGCTCGGCTCCAGCTTGACCATGGAGAAGGTTGCGGCCGCCAAGAAGTTCATAGAGAATCACTACAAAAATCAGAGGAAGAACATCCAAGAGCGCAAGGAGAGACGTTGGATTTTGGAAAGGAAGTTAGCTTCCTCAGATGTGCCAACTGAGGAAAGGATCAACCTCATCAAAGATTTAGAGAGAAAGGAGACAGAATATATGCGATTGAAAAGACACAAGATATGTGTTAATGATTTTGAGCTTTTAACCATAATAGGAAGAGGGGCGTTTGGGGAGGTTAGATTGTGTCGGGAGAAGAAATCTGGAAACATCTATGCCATGAAAAAGCTGAAGAAAACTGAAATGCTCAAGAGAGGCCAGGTGGAACATGTTAGAGCTGAGAGGAACTTGCTGGCTGAAGTTGCCAGCCATTGCATAGTGAAACTTTACTACTCATTTCAGGACGCTGAGTACTTATATCTAATTATGGAATATCTGCCTGGGGGTGACATGATGACTCTGCTGATGAGAGAAGACACTTTAAGTGAGAACGTTGCTAGATTTTACATTGCACAAAGTGTTCTGGCCATAGAGTCTATTCATAAACACAATTACATCCACAGGGATATTAAACCAGATAATCTACTTCTAGATAAAAATGGTCATATGAAGCTATCAGATTTCGGCCTTTGTAAGCCTCTTGAATTTACTACCCTGTCTACACTTCATGAGAATCAGACCATGGATGATGAAAATTTCTCAGAGCCAATGGACATTGATGGGTGCTTTCCTGATACGGACAATCAGAGCAACTGGAGAAGTCCACGTGAGCAACTCCAGCATTGGCAGATGAACAGGAGGAAGTTGGCATTTTCTACTGTGGGAACACCAGACTACATTGCACCTGAAGTGCTGCTGAAAAAAGGATATGGGATGGAATGTGACTGGTGGTCGCTGGGGGCAATAATGTATGAAATGCTGGTTGGTTACCCTCCATTTTACTCAGATGACCCAATAACCACATGCAGAAAGTTGACACACGAGGCCAAGGATCTAATATACAGACTGCTGTGTGATGTTGACCATAGGTTAGGTACTCATGGGGCTCATGAAATCAAGGCTCATTCTTGGTTTAAGGGTGTGGAGTGGGATAAACTGTATGAAATGGAGGCAGCATTTAAACCACAAGTCAATGGGGAGCTGGACACCCAAAACTTCATGAAATTTGATGAAGTAGTAGATCCACCAACAGCAGCAATAGCTGGGTCAGGTCCCTCACGAAAGACGCAACTAACACCCAAAGACCTAAATTTTGTTGGCTACACCTACAAGAACTTTGATGCTGTGAAAGGGCTTCGCCAGTCTTTTGCTGATTCCATGCAAGAATTCTCTTCTAAACGAGCAGCTGAGGAAACAAGTCTACAAATGCTTGCTTCGTCTGGGGATCCCATGTTACCATGA 1482 0.4345 MEDLEEEEKIEEEVLGSSLTMEKVAAAKKFIENHYKNQRKNIQERKERRWILERKLASSDVPTEERINLIKDLERKETEYMRLKRHKICVNDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKTEMLKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDMMTLLMREDTLSENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLEFTTLSTLHENQTMDDENFSEPMDIDGCFPDTDNQSNWRSPREQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPITTCRKLTHEAKDLIYRLLCDVDHRLGTHGAHEIKAHSWFKGVEWDKLYEMEAAFKPQVNGELDTQNFMKFDEVVDPPTAAIAGSGPSRKTQLTPKDLNFVGYTYKNFDAVKGLRQSFADSMQEFSSKRAAEETSLQMLASSGDPMLP 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0741 493 SUPERFAMILY Protein kinase-like (PK-like) 90 426 IPR011009 -
Lele04g0741 493 FunFam Non-specific serine/threonine protein kinase 404 414 - -
Lele04g0741 493 ProSiteProfiles AGC-kinase C-terminal domain profile. 386 460 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lele04g0741 493 FunFam Non-specific serine/threonine protein kinase 296 405 - -
Lele04g0741 493 ProSiteProfiles Protein kinase domain profile. 93 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g0741 493 Gene3D Transferase(Phosphotransferase) domain 1 177 242 - -
Lele04g0741 493 ProSitePatterns Protein kinases ATP-binding region signature. 99 122 IPR017441 GO:0005524
Lele04g0741 493 Pfam Protein kinase C terminal domain 404 450 IPR017892 GO:0004674|GO:0005524|GO:0006468
Lele04g0741 493 Gene3D Phosphorylase Kinase; domain 1 404 414 - -
Lele04g0741 493 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Lele04g0741 493 Pfam Protein kinase domain 94 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g0741 493 Pfam Protein kinase domain 292 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g0741 493 FunFam Non-specific serine/threonine protein kinase 54 176 - -
Lele04g0741 493 Gene3D Transferase(Phosphotransferase) domain 1 299 403 - -
Lele04g0741 493 Gene3D Phosphorylase Kinase; domain 1 71 176 - -
Lele04g0741 493 FunFam Non-specific serine/threonine protein kinase 177 244 - -
Lele04g0741 493 PANTHER SERINE/THREONINE-PROTEIN KINASE 14 433 - -
Lele04g0741 493 SMART pkinase_C_6 386 452 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lele04g0741 493 SMART serkin_6 93 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g0741 493 CDD STKc_NDR_like 91 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0741 Lele-ChrLele04 4506573 4514150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0741 1 492 AGC Kinase Gene Family AT4G33080 77.451 0.0 797
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Lele04g0741 Pkinase 3.1e-43 CL0016