LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele04g0737	ATGTTCCCAAACATGAGTGATGAGATTTCATCTGAGGGTGACTTCACCAGCATCCATAATCAGTGGCCTTTGGAGCTCTCTGAGTACTTGAAATTCGATGGTGATCATTGGCCAGACACTGATCCAGATCAGTGTTTTCTTTCTGGTGGGCATGTTCCCAACCAGTTGATCTACCAAAGCTCCATTGAAATAGGTCACTTGGGAGGAAGTGGCAGCCACGTTGAAGGGTCTTCTAGTAGTGGTAATACCAGAGACATTATAAATGGACGGCAGAAGAAGGAAGGCAGAGAGAGATTTGCATTCAGAACAAGGTCAGAGGTTGAAGTACTGGATGATGGCTATAAGTGGAGGAAGTATGGGAAGAAGATAGTGAAGAATAGCCCCAATCCAAGGAATTACTACAGGTGTTCAGAGGAAGGCTGCCCAGTGAAAAAGAGGGTGGAGAGAGATGGAGATGATCCCAAGTATGTAATAACTACCTATGAAGGCGTTCACACTCACAGCAGTTTTTACTAG	516	0.4496	MFPNMSDEISSEGDFTSIHNQWPLELSEYLKFDGDHWPDTDPDQCFLSGGHVPNQLIYQSSIEIGHLGGSGSHVEGSSSSGNTRDIINGRQKKEGRERFAFRTRSEVEVLDDGYKWRKYGKKIVKNSPNPRNYYRCSEEGCPVKKRVERDGDDPKYVITTYEGVHTHSSFY	171

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele04g0737	171	Gene3D	WRKY domain	97	163	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Lele04g0737	171	MobiDBLite	consensus disorder prediction	72	86	-	-
	Lele04g0737	171	Pfam	WRKY DNA -binding domain	111	167	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Lele04g0737	171	PANTHER	WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED	76	168	IPR044810	GO:0003700
	Lele04g0737	171	SMART	WRKY_cls	110	169	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Lele04g0737	171	MobiDBLite	consensus disorder prediction	68	91	-	-
	Lele04g0737	171	FunFam	WRKY transcription factor 57	96	170	-	-
	Lele04g0737	171	ProSiteProfiles	WRKY domain profile.	105	170	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Lele04g0737	171	SUPERFAMILY	WRKY DNA-binding domain	102	168	IPR036576	GO:0003700\|GO:0006355\|GO:0043565

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele04g0737	Lele-ChrLele04	4492726	4493676	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele04g0737	57	170	WRKY Transcription Factor Family	AT5G64810	59.649	2.97e-41	135

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Lele04g0737		WRKY	2.7e-25	CL0274