Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0730 ATGACCATTGTTCCATATGTCGACCCACACGAAGACGATAGCAACATGCTTCTTAATTTCGACGGCGATCTTAATCCCTCTCTTCTTGATCCATCCAACCACCCTCAGTCGTTTCCCGACTCTTCCTCCTCGGCGTTCCCCGAACTGGATGACGATGCAGTAGCAGCCTTAATGGCCGACATTGGTCCATTATTAGATCATCCTATGATGTTTTCCGTTGGATCATCGTCAGACCACAACGTTGAAGCGGGCCCTTCTGAATTCCACCACCACCAGGAAAATATTGCAGTCCCTCATCAGAATCTGAGTGCTGCAGCATTGTGGCCAGAGTTACCAATCCCGTTTTCTTGCACTTTCTGTCAAGTTCTTCGTGAAATAGTTCATACTGATGGTGTTCTTCACTTTTCCAAACTTCAAATTCACGGCACACTCGGCCTCATCTCTCATGCAGTTCTTTATCAGAACACCGATGTGGGTTCTTCGGCCCATCAACCATTTCAAATGTTCGATTTTTCCGATAAAAGCATAAAGCATATCAAGACTTTCCTAGTCCGACACTGCTTGAACCAAAATTCAATGGGCTACTTCATGATGCAAGATCCACTCTCTCCCTATTACGAAGCCCTCTGCTCTGGATTGGATTGGGCTGAAGACTCCAATGATTACTTCAGTGACCATAAATCTGACATTTCAGGAGCAAAATCTGTTATGGAACAAGAAGTGGATGCCCGGGATGGCGTGGAAAGGACTTCAAACACTTGCCCTGCGGAACAGGGGAATGAAATGCAGAGGGAGGGGATCGAGAAGATGAAATTGAGTGATATGAGAGATTTATTTAGTCTACCAATTCAAAAAGCAGCCAAGAAGTTGAAGTTATGTCCCACAGAAATGAAGAAAATATGTCGTAAACAAGGATTACAACGATGGCCTCACAGAAAGGTGAAAAGCATAATGAGGCAAATATCGATATTGAGAATGGCTTTAGAATCAGAAGAAGGTGCCTCAACAAGGTCACAAACTGAAGCTGAAATTGAGAGACTAGAACAAGAAATGATTCGCCACTGTGGCGGATTCCCCCCAGCTTCATTCAATTTCGAATGA 1101 0.4432 MTIVPYVDPHEDDSNMLLNFDGDLNPSLLDPSNHPQSFPDSSSSAFPELDDDAVAALMADIGPLLDHPMMFSVGSSSDHNVEAGPSEFHHHQENIAVPHQNLSAAALWPELPIPFSCTFCQVLREIVHTDGVLHFSKLQIHGTLGLISHAVLYQNTDVGSSAHQPFQMFDFSDKSIKHIKTFLVRHCLNQNSMGYFMMQDPLSPYYEALCSGLDWAEDSNDYFSDHKSDISGAKSVMEQEVDARDGVERTSNTCPAEQGNEMQREGIEKMKLSDMRDLFSLPIQKAAKKLKLCPTEMKKICRKQGLQRWPHRKVKSIMRQISILRMALESEEGASTRSQTEAEIERLEQEMIRHCGGFPPASFNFE 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0730 366 Coils Coil 330 350 - -
Lele04g0730 366 PANTHER PROTEIN RKD4 96 351 IPR044607 GO:0003700
Lele04g0730 366 Pfam RWP-RK domain 270 317 IPR003035 -
Lele04g0730 366 ProSiteProfiles RWP-RK domain profile. 257 337 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0730 Lele-ChrLele04 4469750 4471206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0730 216 334 NLP Transcription Factor Family AT1G64530 35.156 2.12e-13 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Lele04g0730 RWP-RK 9.3e-20 No_clan