Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0728 ATGGATGGTGATAATAGGAATCAAGTTCCAAAACCAGGCGAAGTAAGCATGACGGGGAAGAAAACGGCTAATGCAGGCGAAGTGTTGGTGGCGATCTCTGTTCAAGACTCCAAAGTGGCTGAATGCAATGACCTCAATACTGGGTATGCTGCATCGAAGTCTCCACGTTTAAACGGTGCTTCCCCTGAAATACGGTTCAGTCCCAGCCCAAAGAAGCCGCCCAAGCATCCTCTTGGCAACGAACACCCTGTTCTGAGAGTCGCTGTCGAGGATAACATTGATTTCACATTGCAAGAACAGTTGGCTGTTAATTCACCATATGGAAACTCCTTCAATAAGGGTTCCCCAAATAACAAATCCAGGATTGTTAATAGAACAGCTTCCATAACTTCTTCCACCATCACTCCCAATACTCCCTTCATGTCATCTCCAGGGCCAGCTGGGGAGGATGAGGATGAAATTTTCTATAGGAAAGTTGAATTGTGTAAAGGGAGGCGCAAGAGAGTAACCACTAAGGTTTTGATCGAGTGGATTGTATTTGTATGCATTATGGGGTGCCTAGTGGTTAGCTTGACTGTTGATAAACTGAAAAACACAATCATTTGGAGTTTGGAGTTTTGGAAATGGTGTGTGCTAGTGTTGGTGATCTTTTGTGGCATGTTGGTCACAAACTGGATAATGTACATCATTGTGTTCTTGATTGAACCGAACTTTTTGCTTAGGAAAAAGGTGCTATATTTTGTTCATGGCCTGAAGAAGAGTGTTCAGACATTGTCTCTAAAGATATTAGCATCAAAATTCTATGTCAGATCTTTCTTTGATAGAATTCAAGAATCAATCTTTTATCAGTATGTTCTGCAGACACTGTCATGGCCTCCACTCATAGAGGAGGCAGAGAAGTTGAAGGTTTATCAGGAGCGCAAAGCATTGGCACATGCCTTGAGTGACACCAAAACAGCCGGGAAACAGCTAAGTAAGCTTGTGTCGGGGATTCTGGTGGTTGTGACCATAGTTGTGTGGCTTCTACTGATGGAGATTGCCACTACAAAAGTACTTTGGTTCTTCTCATCACAGCTAGTACTCGTTGCTTTCATGTTTGGAAACACATGCAATAACATATTTGAAGCTATCACCTTTGTGTTTGTGATGCATCCCTTTGACGTCGGTGATCCATGTGTTGATGGTGTTCAGCTAATTTACCCCAAGCAATTTTTATTTCTTTTTCTCGGGGAGTTCGTGTATTAA 1245 0.4257 MDGDNRNQVPKPGEVSMTGKKTANAGEVLVAISVQDSKVAECNDLNTGYAASKSPRLNGASPEIRFSPSPKKPPKHPLGNEHPVLRVAVEDNIDFTLQEQLAVNSPYGNSFNKGSPNNKSRIVNRTASITSSTITPNTPFMSSPGPAGEDEDEIFYRKVELCKGRRKRVTTKVLIEWIVFVCIMGCLVVSLTVDKLKNTIIWSLEFWKWCVLVLVIFCGMLVTNWIMYIIVFLIEPNFLLRKKVLYFVHGLKKSVQTLSLKILASKFYVRSFFDRIQESIFYQYVLQTLSWPPLIEEAEKLKVYQERKALAHALSDTKTAGKQLSKLVSGILVVVTIVVWLLLMEIATTKVLWFFSSQLVLVAFMFGNTCNNIFEAITFVFVMHPFDVGDPCVDGVQLIYPKQFLFLFLGEFVY 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0728 414 MobiDBLite consensus disorder prediction 1 24 - -
Lele04g0728 414 MobiDBLite consensus disorder prediction 48 81 - -
Lele04g0728 414 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 255 297 IPR016688 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0728 Lele-ChrLele04 4460346 4462430 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0728 257 399 Mechanosensitive Ion Channel Family AT5G12080 48.780 2.78e-39 147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0728 04 4460346 4462430 Lele04g0728 04 4460346 4462430 ECH
Lele03g0727 03 4294136 4296787 Lele04g0728 04 4460346 4462430 ECH
Lele01g0729 01 4282368 4285019 Lele04g0728 04 4460346 4462430 hybridization
Lele02g0711 02 4304328 4307042 Lele04g0728 04 4460346 4462430 hybridization