Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0726 ATGTCAATGGACGATCCTCGGAGCAGTCAGGGACGGAAGAATAAGGAACCTCGCAGAGAAGCCTGGACACCTGAGGAAGACAAAAAATTGGTTCAAGTCATTGAATTACACGGCCCTAAGAGGTGGAAGTTTCTGGCAGCCAATGCAGGTCTAAATCGATGTGGCAAGAGTTGCAGACTGAGATGGTTAAATTACCTTAGACCCAACATCAAGAGAGGCAATATATCAGACCAAGAGGAGGACTTAATCCTCAGGCTTCACAAACTCCTAGGCAACAGGTGGTCTTTGATAGCTGGAAGACTCCCAGGTCGAACTGATAATGAGATTAAGAATTACTGGAACTCTCATTTGAGCAAGAAGATAAGTCCGAGGAAACAAAACCGATGTTTCAAACAGGATTCCACGGTGGAGATAACTACAGTACCAAAGAAAGCTGCAGTAGTTAGTAGTAATGAAGAGCAGGTCGGGCATAAGGTGGTGGAGAACTCGAAGCCTGGCTTTGTTGAAGACCATGACCTGTTCATTCCTTGTAGCAACGAAGGACCGCTAAATTTGGAATGGGTGAGCAAGTTTCTTGAAATGGAAGAAACTTGGTTTCGATTTGCAGATCCGTGA 615 0.4504 MSMDDPRSSQGRKNKEPRREAWTPEEDKKLVQVIELHGPKRWKFLAANAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKISPRKQNRCFKQDSTVEITTVPKKAAVVSSNEEQVGHKVVENSKPGFVEDHDLFIPCSNEGPLNLEWVSKFLEMEETWFRFADP 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0726 204 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 66 IPR017930 -
Lele04g0726 204 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 13 152 - -
Lele04g0726 204 CDD SANT 76 117 IPR001005 -
Lele04g0726 204 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 121 IPR017930 -
Lele04g0726 204 Gene3D - 19 71 - -
Lele04g0726 204 SMART sant 71 119 IPR001005 -
Lele04g0726 204 SMART sant 18 68 IPR001005 -
Lele04g0726 204 FunFam MYB-related transcription factor 18 71 - -
Lele04g0726 204 ProSiteProfiles Myb-like domain profile. 67 117 IPR001005 -
Lele04g0726 204 MobiDBLite consensus disorder prediction 1 24 - -
Lele04g0726 204 CDD SANT 21 66 IPR001005 -
Lele04g0726 204 ProSiteProfiles Myb-like domain profile. 14 66 IPR001005 -
Lele04g0726 204 Gene3D - 75 145 - -
Lele04g0726 204 SUPERFAMILY Homeodomain-like 18 113 IPR009057 -
Lele04g0726 204 Pfam Myb-like DNA-binding domain 72 117 IPR001005 -
Lele04g0726 204 Pfam Myb-like DNA-binding domain 19 66 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0726 Lele-ChrLele04 4456469 4457221 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0726 7 158 MYB Transcription Factor Family AT5G40330 52.903 5.96e-52 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele04g0726 Myb_DNA-binding 2.7e-17 CL0123