Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0719 ATGATCCATAAGAAGATTACATGGAGGTCTATCATCTTGATGTTCAGTTGTTACAAGACTAATAAATGCCCACTGAAGGAATCCAAAAAGAAGATCACCAAACAAAGTTCTTTTCAGAGACTAAGCCTCTCTGATATCAGCATTTCGAGCTGCGGTCAGGCCATCGACGATCTTTCGATCTCCCTTGTTGGCCAAAAACTTTATCCATTTACACTTGAAGAACTTAGAGAAGCAACACATAATTTCTCTTGGAGTAATATGATTGGTGAAGGTGGATTTGGACCTGTGTACAAGGGATTTGTTGAGGATAAGCTTAGACCTGGTGGTTTGAAACCTCAACCTGTGGCTGTTAAACGACTGAACTTGGATGGTATGCAAGGTCATAGGGAATGGCTGGCAGAGATAATCTTTCTGGGACAGCTAAAGCATCCGAATCTTGTCAACTTACTTGGGTACTGTTATGAGGAGGAACACAGGCTTTTAGTGTATGAATACATCCCAAGAGGAAGCTTGGAGAGCCAACTTTTTAGAAGATACGCTGCAGCCTTGCCGTGGTCAACCAGGATAAAAATTGCACTGGGAGCAGCCAAGGGCCTTGCCTTCCTTCATGAAGCAGACAAACCCGTGATATATAGAGATTTCAAAACTTCAAATATCTTACTAGACTTGGATTATACGGCTAAATTGTCAGACTTTGGGTTTGCAAAAGATGGACCTGAAGGGGAAGACACACACGTAACAACACGAGTAATAGGAACACAGGGCTATGCAGCACCAGAGTACATCATGACAGGCCACCTTACAACTAAGAGCGACGTGTATAGCTATGGAGTGGTGCTATTAGAACTGATAACAGGAAGAAGGATAATGGATAAGCGAAGGCCAAATGGAGAGAAAAGTCTAGTAGAATGGGCAAGGCCTTTGTTGAGGGATCAGAGAAAGCTTCACCAGTTCATAGACCCTCGACTCGAAGGACGATTTCCTATCAAAGGAGCTCATAAAGTCGCCGCCTTGGCTTACAAGTGCTTGAGCCACCACCCACACCCTAGACCCACAATGAGCGATGCGGTCAACATATTGGAGCCACTTCAGCACTTCGATGATACGTTCATAGAACCCTTTGTGTATATAGCCAATTAA 1140 0.4377 MIHKKITWRSIILMFSCYKTNKCPLKESKKKITKQSSFQRLSLSDISISSCGQAIDDLSISLVGQKLYPFTLEELREATHNFSWSNMIGEGGFGPVYKGFVEDKLRPGGLKPQPVAVKRLNLDGMQGHREWLAEIIFLGQLKHPNLVNLLGYCYEEEHRLLVYEYIPRGSLESQLFRRYAAALPWSTRIKIALGAAKGLAFLHEADKPVIYRDFKTSNILLDLDYTAKLSDFGFAKDGPEGEDTHVTTRVIGTQGYAAPEYIMTGHLTTKSDVYSYGVVLLELITGRRIMDKRRPNGEKSLVEWARPLLRDQRKLHQFIDPRLEGRFPIKGAHKVAALAYKCLSHHPHPRPTMSDAVNILEPLQHFDDTFIEPFVYIAN 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0719 379 CDD STKc_IRAK 88 363 - -
Lele04g0719 379 FunFam Serine/threonine-protein kinase BIK1 49 165 - -
Lele04g0719 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Lele04g0719 379 ProSiteProfiles Protein kinase domain profile. 82 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g0719 379 SUPERFAMILY Protein kinase-like (PK-like) 59 363 IPR011009 -
Lele04g0719 379 Gene3D Transferase(Phosphotransferase) domain 1 166 371 - -
Lele04g0719 379 Pfam Protein tyrosine and serine/threonine kinase 84 359 IPR001245 GO:0004672|GO:0006468
Lele04g0719 379 FunFam Serine/threonine-protein kinase PBS1 166 371 - -
Lele04g0719 379 PANTHER OS01G0588500 PROTEIN-RELATED 37 364 - -
Lele04g0719 379 Gene3D Phosphorylase Kinase; domain 1 26 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0719 Lele-ChrLele04 4373146 4374572 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0719 70 360 Glycoside Hydrolase AT3G07070 53.401 1.33e-101 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele04g0719 Pkinase 1.5e-45 CL0016