Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele04g0699 | ATGGCTTCCAAGCTCTGTGACTCCTGCAAGTCCGCCACCGCCACCCTCTTCTGCCGCGCCGACTCCGCCTTCCTCTGCCTCGGCTGTGACGCCAAGGTCCATGCCGCCAACAAGCTCGCTTCCCGCCACGCGCGGGTCTGGGTCTGCGAGGTCTGCGAGCAAGCCCCTGCTCACGTCACCTGCAAGGCTGACGCTGCTGCTCTCTGCATCACCTGTGACCGTGACATCCACTCTGCCAATCCTCTCGCTCGCCGTCACGAGCGCGTCCCCGTAACTCCCTTCTATGATCCCGTCCACTCCGTCGGTGCCCCGTCCGGCGCTGCCATCAACTTCCTCAACGACCGTTACTTCTCCGACGCTGACGCAGATGCTGATGTCAGCAGGGAAGAGGCCGAAGCGGCTTCTTGGTTGCTGCCTAACCCTTCCAACCCGAAGGCCGTGGAGAGCCCAGATCTGAACTCCGGTGAGTACGTGTTTCCCGAAATGGAGCCATGCCTAGATCTGGATTTCGGGCCGGTGGATCCAAAAGCGGAAGCTCAGGAGCAGAACAGTTCCGGCACCGACGGTGTTGTGCCGGTACAGAGCAAGGTTGCACAGATTCCATCCCTCAACGACCACTACTATGACATGGAATTGACTGGGTCCAAGAATTTCACCTACGGTTACAACGGCAGCCAGTGCCTGAGCCAGAGTGTGTCGTCGTCTTCCATGGAGGTCGGGGTGGTTCCAGATGGGAATGCGATATCAAACGGTTACAGCAAGACAATGATGGGGAGTGAGAATCAGACGGTGCAGATATCCGCCGCAGACAGGGAAGCGAGGGTACTGAGGTACAGGGAGAAGAGGAAGAACCGAAAGTTCGAGAAGACCATTCGGTACGCTTCCAGAAAGGCGTATGCAGAAACCAGACCCAGGATCAAAGGCAGATTCGCAAAACGATCGGAGGTGAACCGCTTCGGAGGATACGGCGTCGTACCGAGCTGTTGA | 987 | 0.5836 | MASKLCDSCKSATATLFCRADSAFLCLGCDAKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCITCDRDIHSANPLARRHERVPVTPFYDPVHSVGAPSGAAINFLNDRYFSDADADADVSREEAEAASWLLPNPSNPKAVESPDLNSGEYVFPEMEPCLDLDFGPVDPKAEAQEQNSSGTDGVVPVQSKVAQIPSLNDHYYDMELTGSKNFTYGYNGSQCLSQSVSSSSMEVGVVPDGNAISNGYSKTMMGSENQTVQISAADREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRSEVNRFGGYGVVPSC | 328 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele04g0699 | 328 | CDD | Bbox1_BBX-like | 48 | 91 | - | - | |
Lele04g0699 | 328 | CDD | Bbox1_BBX-like | 5 | 48 | - | - | |
Lele04g0699 | 328 | ProSiteProfiles | Zinc finger B-box type profile. | 44 | 91 | IPR000315 | GO:0008270 | |
Lele04g0699 | 328 | Pfam | CCT motif | 271 | 313 | IPR010402 | GO:0005515 | |
Lele04g0699 | 328 | ProSiteProfiles | CCT domain profile. | 271 | 313 | IPR010402 | GO:0005515 | |
Lele04g0699 | 328 | Pfam | B-box zinc finger | 4 | 43 | IPR000315 | GO:0008270 | |
Lele04g0699 | 328 | Pfam | B-box zinc finger | 46 | 91 | IPR000315 | GO:0008270 | |
Lele04g0699 | 328 | PANTHER | ZINC FINGER PROTEIN CONSTANS-LIKE 4 | 6 | 315 | IPR045281 | GO:0009909 | |
Lele04g0699 | 328 | SMART | bboxneu5 | 1 | 48 | IPR000315 | GO:0008270 | |
Lele04g0699 | 328 | SMART | bboxneu5 | 49 | 91 | IPR000315 | GO:0008270 | |
Lele04g0699 | 328 | ProSiteProfiles | Zinc finger B-box type profile. | 1 | 48 | IPR000315 | GO:0008270 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele04g0699 | Lele-ChrLele04 | 4249275 | 4250337 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele04g0699 | 1 | 327 | C2C2-CO-like Transcription Factor Family | AT5G24930 | 61.708 | 3.77e-141 | 402 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-CO-like | Lele04g0699 | zf-B_box | 9.3e-07 | No_clan |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele04g0699 | 04 | 4249275 | 4250337 | Lele04g0699 | 04 | 4249275 | 4250337 | ECH | |
Lele01g0697 | 01 | 4098537 | 4105360 | Lele04g0699 | 04 | 4249275 | 4250337 | hybridization | |
Lele02g0683 | 02 | 4111513 | 4112575 | Lele04g0699 | 04 | 4249275 | 4250337 | hybridization |