Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0697 ATGGTCGCAATGACTGCTGCTCGTTCGCCATTATTGAAGAAAGTTGTAGACCTCACAGACAGAAATAGGACGCAGGAAGAAGCTCTATCAAGGCGAAACCACGGTCAGCCGCCCGGGTTTCCTAGTAGTGTTGTTGGCTCACTGGGTTGTGCTACGCATTGTTTCAAACAGTTCATGGTCAGATTTCTTCCACGGGTTCCTTCTGCGAAATCTGCTCTAACTGAACTTCTGTCGAAGATTTGCTCATCGGTCAATGAGGAATGCCTTCGTCTTTGCAGCTATCTGCTGTCACCGTGGCTCCAGAAGTATTCAACTGGCTTCACCAGTGTGCATGGGGACAAGCCATCTGCTGAGTATGCAAAGCTTAGGAGAGAATCCCTAGAAAGTGAATTTGGGCTTGCTCTTGGAACTTATGGCTCCAAAACTTTCTCCACTGTCAATCGGTTTGGCCCATTTTTGGCTTTGTACAGGGCAGTGATTATTTCATTTCATGTGTTCGGGCTAGCATTTTGGCAGCTCTTTGTTCAAGACATAGAAAAGCGTGCAATCAAGTTTCGCAAAACTCTAATACTCTTGGGTCCCTTCTACGTTAAGGCAAGTTTCTTTTACATGCTATTTCCTAGTCAGAAGAAGTATTGCATTTCAACTGGATTGCATTTTCTTTTCTCCGAACTTGGCCAGGCTTTGAGCACTAGTCCTGATATACTACCAACTGTATACTGCCAAGAACTTGCTAAGCTACAGGATCAAATACCTCCATTTTCAACTAAAGTTGCCATTAGATCTATAGAAACCCAGCTAGGTGCCCCTGTTTCTGAGATATTTAGTGACATTAGCCCAGAGCCTATTGCAGCAGCATCCTTAGGGCAAGTTTATAAAGCTCATCTGCATTCTGGAGAGTTGGTAGCTGTAAAAGTACAGAGGCCTGGCATGTCACTTTCACTAACCCTCGATGCCTTGTTGTTCCATATGATTGGTGGCCAGCTAAAGCGATTTGCTAAGGCTCGTAGAGATCTTATTGTAACAGTGAATGAGATAGTCAGGCACATGTTTGATGAAATTGATTATGTCCTAGAAGGAAAAAATGCTGAGCGTTTTGCTTCTCTTTACAGCCTCCAAGCAAGCAAGTTAACACTTAGCATGGGATATAGATTGCTTACTGATGAAACACGCCTGAAGAATGCTTCTTTGAACAAAAGAGAACTCATTGACCAGGGACTGTACTGCTCTTTGATGCAACTGCTTGTGGTTGGATATTTCCATGCTGATCCACATCCAAGAAACCTGGTGGCAATCGATGATGGATCACATGCATATTTTGACTTTGGAATGATGGGGGATATTCCTAGGCATTACCGGATTGGACTTATTCAAATGACTCAGAAGAACGAGTTGGATGTTGACTGTTTTCTTGTGCACTTTGTTAATCATGATTCTCTGGGTTTGGCAAATGATTTTCTTTCTTTGGGATTTATTCCTGAAGGAGTTGATGTATATGCAGTTTCTGATTCTTTGAAAGCATCCTTTGCTGATCGAACCAGTCAATCACGAGATTTCCAGGGAGTTATGAACCAACTTTATGATGTTATGTATGAATTTAACTTCTCCCTCCCACCAGACTATGCTCTAGTGATAAGAGCATTGGGATCACTTGAGGGCACAGCAAAAGTTCTGGATTCTGATTTTAAACAGCAATATCTGAGCAGGCTTCTGAGTCAACTGAAGACTGAGAAGTCTTCAAGCCCTTTGGGTTGGAAGTACTTTGACATGCATTCTATTGTTGATGCCACTGAAGATCTTTTATTGTTCCTTCTATCAGACAAGGGTCTGAGAGTGCGTCTTTTCCTTCTTCGAGATATAATAGAAGCGGCTGATTTATTCGTGCAAGATGAAATCATCAATCAATTGTTAAAGGAGAGGCCCCAGGGCCAAAGCAGATTGCTGTTTGAGTTGGCGCCAGAGGAGTGGACAGCCATGCTTCTACGGATGGCAGTGAAACCTGATGTCCACAAATTTACTATAGACATTATTTCAGCTCTTGTTTCTCATCTTAACCACAGACTGCAAGATGCGTCTTAG 2079 0.4286 MVAMTAARSPLLKKVVDLTDRNRTQEEALSRRNHGQPPGFPSSVVGSLGCATHCFKQFMVRFLPRVPSAKSALTELLSKICSSVNEECLRLCSYLLSPWLQKYSTGFTSVHGDKPSAEYAKLRRESLESEFGLALGTYGSKTFSTVNRFGPFLALYRAVIISFHVFGLAFWQLFVQDIEKRAIKFRKTLILLGPFYVKASFFYMLFPSQKKYCISTGLHFLFSELGQALSTSPDILPTVYCQELAKLQDQIPPFSTKVAIRSIETQLGAPVSEIFSDISPEPIAAASLGQVYKAHLHSGELVAVKVQRPGMSLSLTLDALLFHMIGGQLKRFAKARRDLIVTVNEIVRHMFDEIDYVLEGKNAERFASLYSLQASKLTLSMGYRLLTDETRLKNASLNKRELIDQGLYCSLMQLLVVGYFHADPHPRNLVAIDDGSHAYFDFGMMGDIPRHYRIGLIQMTQKNELDVDCFLVHFVNHDSLGLANDFLSLGFIPEGVDVYAVSDSLKASFADRTSQSRDFQGVMNQLYDVMYEFNFSLPPDYALVIRALGSLEGTAKVLDSDFKQQYLSRLLSQLKTEKSSSPLGWKYFDMHSIVDATEDLLLFLLSDKGLRVRLFLLRDIIEAADLFVQDEIINQLLKERPQGQSRLLFELAPEEWTAMLLRMAVKPDVHKFTIDIISALVSHLNHRLQDAS 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0697 692 Pfam ABC1 atypical kinase-like domain 246 369 IPR004147 -
Lele04g0697 692 Pfam ABC1 atypical kinase-like domain 386 459 IPR004147 -
Lele04g0697 692 SUPERFAMILY Protein kinase-like (PK-like) 248 475 IPR011009 -
Lele04g0697 692 CDD ABC1_ADCK3-like 246 486 - -
Lele04g0697 692 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 123 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0697 Lele-ChrLele04 4229096 4239390 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0697 04 4229096 4239390 Lele25g0692 25 4368783 4369414 CCT
Lele04g0697 04 4229096 4239390 Lele26g0697 26 4444957 4445588 CCT
Lele04g0697 04 4229096 4239390 Lele27g1400 27 20313998 20314628 CCT
Lele04g0697 04 4229096 4239390 Lele28g0680 28 4357723 4359576 CCT
Lele04g0697 04 4229096 4239390 Lele04g0697 04 4229096 4239390 ECH
Lele01g0695 01 4080896 4088243 Lele04g0697 04 4229096 4239390 hybridization
Lele02g0681 02 4091531 4100425 Lele04g0697 04 4229096 4239390 hybridization